Gene Ksed_12880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_12880 
Symbol 
ID8372796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1329883 
End bp1330704 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content76% 
IMG OID644991565 
Productindole-3-glycerol phosphate synthase 
Protein accessionYP_003149085 
Protein GI256825125 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0134] Indole-3-glycerol phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.315308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0294244 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCCCA CGGTGCTGGA CGCGATCCTC GAGGGGGTCC GCGAGGACGT CGCCGACCGC 
GAGCGGGCGG TGCCCCGGGC CGCCCTGGCG CAGGTCCCGG TGGCCGCACC GCGCCCGGTG
CTGGGCGCCT TCCGCGCTCC CGGCGCCTCC CTCATCGCGG AGATCAAGCG CAGCAGCCCC
AGCAAGGGGG TGCTGGCCCC CATCGGTGAG CCGGCCGACC TCGCCCGCAC CTACGAGCGC
GCCGGCGCCA CGGCCGTCTC GGTGCTCACC GAGCGCCGCC GGTTCGGGGG GTCGCTGGCT
GACCTGGTGG CCGTGCGTGC CGCGGTGGAC CTGCCCCTGC TGCGCAAGGA CTTCGTGGTG
GGCGAGTACC AGGTGCACGA GGGACGGGCC GCCGGCGCCG ACCTGGTGCT GCTCATCGTC
GCGGCCCTGG ACGACGCGCA GCTCTCCGAC CTGCTCGCCC TCACCCACGA CCTGGGCATG
GAGGCCCTGG TCGAGGTGCA CGACGAGGCC GAGCTCGAAC GCGCGGTCAC CGTGGCCAGC
CGCATCATCG GTGTCAACAG CCGCAACCTG AAGACCCTCG AGGTGGACCC CGGCACCCCG
GCCCGGCTGG TGCCGCAGGT GCCTGCCGAC GTGGTCGCGG TCAGCGAGTC CGGCATCCGC
ACCCCCCAGG ACGTCGACAC CGCCGTCCGC GCCGGCGCCC GCGCCGTCCT GGTGGGCGAG
GCACTCGTCA CGGCGGAGGA CCCCGGCGCC GCTGCGGCGG CCCTCGTCGC GGCCGGCGCC
CCCTCATCGC ACGCCCCCAC GACCGGAGGT GCCTCGGCAT GA
 
Protein sequence
MTPTVLDAIL EGVREDVADR ERAVPRAALA QVPVAAPRPV LGAFRAPGAS LIAEIKRSSP 
SKGVLAPIGE PADLARTYER AGATAVSVLT ERRRFGGSLA DLVAVRAAVD LPLLRKDFVV
GEYQVHEGRA AGADLVLLIV AALDDAQLSD LLALTHDLGM EALVEVHDEA ELERAVTVAS
RIIGVNSRNL KTLEVDPGTP ARLVPQVPAD VVAVSESGIR TPQDVDTAVR AGARAVLVGE
ALVTAEDPGA AAAALVAAGA PSSHAPTTGG ASA