Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_12880 |
Symbol | |
ID | 8372796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 1329883 |
End bp | 1330704 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644991565 |
Product | indole-3-glycerol phosphate synthase |
Protein accession | YP_003149085 |
Protein GI | 256825125 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 0.315308 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0294244 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCCCA CGGTGCTGGA CGCGATCCTC GAGGGGGTCC GCGAGGACGT CGCCGACCGC GAGCGGGCGG TGCCCCGGGC CGCCCTGGCG CAGGTCCCGG TGGCCGCACC GCGCCCGGTG CTGGGCGCCT TCCGCGCTCC CGGCGCCTCC CTCATCGCGG AGATCAAGCG CAGCAGCCCC AGCAAGGGGG TGCTGGCCCC CATCGGTGAG CCGGCCGACC TCGCCCGCAC CTACGAGCGC GCCGGCGCCA CGGCCGTCTC GGTGCTCACC GAGCGCCGCC GGTTCGGGGG GTCGCTGGCT GACCTGGTGG CCGTGCGTGC CGCGGTGGAC CTGCCCCTGC TGCGCAAGGA CTTCGTGGTG GGCGAGTACC AGGTGCACGA GGGACGGGCC GCCGGCGCCG ACCTGGTGCT GCTCATCGTC GCGGCCCTGG ACGACGCGCA GCTCTCCGAC CTGCTCGCCC TCACCCACGA CCTGGGCATG GAGGCCCTGG TCGAGGTGCA CGACGAGGCC GAGCTCGAAC GCGCGGTCAC CGTGGCCAGC CGCATCATCG GTGTCAACAG CCGCAACCTG AAGACCCTCG AGGTGGACCC CGGCACCCCG GCCCGGCTGG TGCCGCAGGT GCCTGCCGAC GTGGTCGCGG TCAGCGAGTC CGGCATCCGC ACCCCCCAGG ACGTCGACAC CGCCGTCCGC GCCGGCGCCC GCGCCGTCCT GGTGGGCGAG GCACTCGTCA CGGCGGAGGA CCCCGGCGCC GCTGCGGCGG CCCTCGTCGC GGCCGGCGCC CCCTCATCGC ACGCCCCCAC GACCGGAGGT GCCTCGGCAT GA
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Protein sequence | MTPTVLDAIL EGVREDVADR ERAVPRAALA QVPVAAPRPV LGAFRAPGAS LIAEIKRSSP SKGVLAPIGE PADLARTYER AGATAVSVLT ERRRFGGSLA DLVAVRAAVD LPLLRKDFVV GEYQVHEGRA AGADLVLLIV AALDDAQLSD LLALTHDLGM EALVEVHDEA ELERAVTVAS RIIGVNSRNL KTLEVDPGTP ARLVPQVPAD VVAVSESGIR TPQDVDTAVR AGARAVLVGE ALVTAEDPGA AAAALVAAGA PSSHAPTTGG ASA
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