Gene Ksed_12800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_12800 
Symbol 
ID8372788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1322193 
End bp1322645 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content74% 
IMG OID644991557 
ProductProtein of unknown function (DUF2581) 
Protein accessionYP_003149077 
Protein GI256825117 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.0224301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00565206 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCGCCC CGGAGGTGAG CAGCCGGGAG CAGAGCGACG CGCTGCGGCC GTTCCGCCCC 
CGCCGCGGGC GGTGGGTGGC CGTCGGCTCG GCGGTCTTCC TGCTGGTGCT CTTCATCGCG
ATCGCCGTGC TGGGGGAGGG CTGGAACCTG CCCGACCGGG TCTTCACCGC CCTGGCCGGA
GTCGGTCTGG CGGCCTTCCT GTGGCGCTAC GCCGCCATCT CGGCGGTGCC CGACCGGCAG
GGTATGACCG TCCGGAACCT CTTCTCCACC CAGCGGGTCG AGTGGTCCGA GGTCCGGGGC
GTGGTCTTCA GCCCCGGAGA CCCCTGGGTA CGCCTGCAGC GCACCCGCGG TCAGGAGGAC
CTCGCCGTCA TGGCCATCCA GGCCGCCGAC GGGGAGGGCT CGCGCACCGA GGCGAGCCGG
CTGGCCGGCA TCGTGGAGGC GCTGCGGCGC TGA
 
Protein sequence
MSAPEVSSRE QSDALRPFRP RRGRWVAVGS AVFLLVLFIA IAVLGEGWNL PDRVFTALAG 
VGLAAFLWRY AAISAVPDRQ GMTVRNLFST QRVEWSEVRG VVFSPGDPWV RLQRTRGQED
LAVMAIQAAD GEGSRTEASR LAGIVEALRR