Gene Ksed_12770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_12770 
Symbol 
ID8372785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1319017 
End bp1320027 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content75% 
IMG OID644991554 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_003149074 
Protein GI256825114 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.348945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0208178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCCTCG TGCGCATCGT TTTCGCTGGG ACCCCCGAGG CCGCCCTGCC CTCCCTGGAG 
CACCTGCTCG ACAGTGCCCG GACGGCTGAC GGGCGGGATC GTCACGAGGT GGTGGGCGTC
CTGACCCGCC CGGACGCACG GGTGGGACGG GGCCGGAAGC TGCGCCCCAG CCCGGTCAAG
GCGCGCGCGC TCGAGCACGG GCTGCCCGTC ATCGAGAGCG ACCGCCCGTG GGAGGACGAG
CCGCTGGCCT CCCTGCGGGA GCTGGCCCCG GACGTGGGGG CGATCGTCGC CTACGGGGCG
CTCCTGCCCA CCAGCGTGCT GGAGCTGCCG ACCCACGGCT GGGTGAACCT CCACTTCAGC
CTGTTGCCCG CCTGGCGTGG CGCGGCGCCG GCGCAGCGCG CCCTGATGGC CGGTGACGAC
CTGACCGGGG CCACCACCTT CGTGCTCACC GAGGGCATGG ACACCGGCCC CGTGCTGGGC
ACCCTGACCG AGGCGATCCG CCCCACCGAC ACCGCCGGCG ACCTGCTGGA GCGGTTGTCC
GAGGCAGGTG CCCCGCTGCT GACCGACAGC CTCCACGGGC TGGTCTCCGG AGCGCTGGCC
CCCGTCCCGC AGCCGGCCGA CGGGGTCTCG CGTGCCCCCA AGCTGACGGT GGACGAGGTG
CGCTTGGACT TCACGCAACC GGCCTTCGCC GTCGTACGGC GCGTGGCCGG CGCGTCCCCG
GCGCCGGGGG CGTGGACGAC CTTCCGCGGT GACCGCCTCA AGGTCCTCCA GGCCGCCCAG
GTGGCCGGCG CGCCCAGCAG CACCGGTGCA GGAACCGCGG GGCCCGACGA CCCGTCCACC
CCCCACCTGC CGCCGGGCCG GCTCCTGCTC CACGACGGAC AGGTGCTGGT GGGCACGGCC
ACGCACCCGG TGCGGCTGCA GCGGGTGCAG CCACCGGGCA AGCAGGCCAT GGAGGCAGAG
GCATGGGCCC GCGGGGCCCG ATTCGACGAC CAGGAGGCGC TCGGTGGCTG A
 
Protein sequence
MPLVRIVFAG TPEAALPSLE HLLDSARTAD GRDRHEVVGV LTRPDARVGR GRKLRPSPVK 
ARALEHGLPV IESDRPWEDE PLASLRELAP DVGAIVAYGA LLPTSVLELP THGWVNLHFS
LLPAWRGAAP AQRALMAGDD LTGATTFVLT EGMDTGPVLG TLTEAIRPTD TAGDLLERLS
EAGAPLLTDS LHGLVSGALA PVPQPADGVS RAPKLTVDEV RLDFTQPAFA VVRRVAGASP
APGAWTTFRG DRLKVLQAAQ VAGAPSSTGA GTAGPDDPST PHLPPGRLLL HDGQVLVGTA
THPVRLQRVQ PPGKQAMEAE AWARGARFDD QEALGG