Gene Ksed_12640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_12640 
Symbol 
ID8372772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1303951 
End bp1304364 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content69% 
IMG OID644991541 
ProductNusB antitermination factor 
Protein accessionYP_003149061 
Protein GI256825101 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0537288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCTC GTTCCAAGGC CCGCAAGCGC GCGGTCGACC TGCTCTTCGA GGCCGAGCAG 
CGGTCCCTGA ACGTCGAGGT GCTCATGGCA CGCCGGCGGG AGGAGCCGGA GGCCCAGGTC
GTGGTGCCCG AGTTCACCGT CACCCTCGTC GAGGGCGTGG TGTCCCACTG GGCCTCGATC
AACGATGCCC TGTCCTCCTG GTCGCAGGGC TGGTCGCTCG AGCGCATGCC GGCGGTGGAC
CGCGCCATCC TGCGCCTGGG CACCTACGAG ATCGTGTGGG CCGAGGACGT GCCCGATGCG
GTGGCCATCA GCGAGGCCGT GAACCTCGCC GCCCACCTGT CCACCGACGA GTCCCCGAAC
TTCGTCTCGG GGCTGCTCAC CCGCATCAGC CAGATGAAGG CGACCATCGT CTGA
 
Protein sequence
MAARSKARKR AVDLLFEAEQ RSLNVEVLMA RRREEPEAQV VVPEFTVTLV EGVVSHWASI 
NDALSSWSQG WSLERMPAVD RAILRLGTYE IVWAEDVPDA VAISEAVNLA AHLSTDESPN
FVSGLLTRIS QMKATIV