Gene Ksed_12630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_12630 
Symbol 
ID8372771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1303337 
End bp1303951 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content66% 
IMG OID644991540 
Producttranslation elongation factor P (EF-P) 
Protein accessionYP_003149060 
Protein GI256825100 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.05803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGTGC ACCGAGGGCA CACGAACTCC CCGACGACGC AGAAGGACTT CCCCGTGGCC 
ACGACGAACG ACCTGAAGAA CGGCATGGTG CTCAAGCTGG AGGGCCAGCT CTGGCAGGTG
CAGGAGTTCC AGCACGTCAA GCCCGGCAAG GGGCCGGCCT TCGTGCGCAC CAAGATCAAG
AACGTCCTGT CCGGCAAGAC CGTCGACAAG ACCTTCAATG CCGGCACGAA GGTGGAGACC
GCCACGGTCG ACCGCCGGGA CATGCAGTAC CTGTACAACG ACGGTGACTC CTTCATCTTC
ATGGACACCA AGGACTACGA GCAGCTCCCG ATCCCCGCCG AGATCGTCGG CGACGCCTCT
CGCTTCATGC TGGAGAACCA GGAGGTGCAG GTCTCCACGC ACGAGGGCGT GCCGCTGTTC
ATCGAGCTGC CCCCGAGCGT CGAGCTGCGC ATCACCCACA CCGACCCGGG CCTGCAGGGC
GACCGGTCGA CCGGTGGCAC CAAGCCCGCC ACGCTGGAGA CCGGCGCCGA GATCCAGGTG
CCGCTGTTCC TGGAGAGCGA CACCCTGGTG AAGGTCGACA CCCGCGACGG CTCGTACATC
AGCCGCGTCT CCTGA
 
Protein sequence
MPVHRGHTNS PTTQKDFPVA TTNDLKNGMV LKLEGQLWQV QEFQHVKPGK GPAFVRTKIK 
NVLSGKTVDK TFNAGTKVET ATVDRRDMQY LYNDGDSFIF MDTKDYEQLP IPAEIVGDAS
RFMLENQEVQ VSTHEGVPLF IELPPSVELR ITHTDPGLQG DRSTGGTKPA TLETGAEIQV
PLFLESDTLV KVDTRDGSYI SRVS