| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_12560 |
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| Symbol | |
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| ID | 8372764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | + |
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| Start bp | 1293352 |
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| End bp | 1295133 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644991533 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_003149053 |
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| Protein GI | 256825093 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.100875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.530039 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGAC GGCGCCGCCG GGAGTTCGGA TGGTTCTCCC ACGGTGCTCC CCAGCAGGCC
GGGTGGCACC GCACGGGGCG CCTGCCCTGG CAGCGGGTGT CCCTCGAGCC CACACCGGCC
GAGGTCGTGC TCATCGGGCC GCCGGGGGTG GGCAAGTCCA GCGTGGCCAA GCTGCTGGCG
GGGTCGTCCC GCACCGTCAT CGACACCGAT CGTCAGGTGG CTGAGCGCGC GGGGTGCAGC
ATCCCCGAGA TCTTCGAGCG CCACGGCCAG GAGCACTTCC GGGCCCTGGA GGCCGAGGTG
GTGCGCGAGG CCGTCACCAC GAACGGGGGT TCCCTGCGGG CTGGTGGGGT GGTGAGCCTG
GGCGGCGGGG CGGTCATGAC CCATGCCGTG CAGGAGGTGC TGCGCGAGCA CGCCGCCGCC
GGCCGGGCCG TCATCTGGCT GCAGGTGGAC CCCGAGGCGA TGGCAGAGCG TCTCGGCGAA
GGGGGCCGCC CCCTCCTGGC CGGGGACCCC GAGGAGGCAC TGATTCGCTG GCGCACCCTG
GAGGCCGCTC GCCGCGACAC CTACGCGGAG CTGGCCACGC ACGTGATCGA CACGACCGGG
CGCCCGGCCC ACGAGGTGGC GGCTGTCCTC CGGCAACGGC TCGACGAGCC ACTCCACGGG
CCGGTGGCCG CGCACGCGGG GCTGCGGGTC TCGGTGTCCA CGAGCACCGG CCAGGACTAC
CCGGTGGCGA TCGGCCACCG GGCGCTCCGG GAGCTGCCCG ACCTCCTGAC TGCGACCGGC
GGCGTGCCCC ACCGCGCGCT CGTGGTGCAC CAGCCGGACG TTCAGGACGC TGTGGAATCG
GTGGCCGACA CGCTGACGGC GTTGGGCACA CAGGTGCACC GTCACCGCAT CGAGCCCGCC
GAGCCGGGCA AGAGCCTGGC CGGCGTCGCC GGCATCTGGG AGGCCTGCGC CGGCGCGGGG
CTCGACCGGC ACGACCTGCT GGTCGCCGTC GGGGGAGGGG CTGCCACGGA CGTCACCGGC
TTCGCCGCGG CCACCTGGAT GCGGGGTGTC GACGTCGTGC ACGTGCCGAC CACCCTGTTG
GCGATGGTGG ACGCCTCCGT CGGCGGGAAG ACCGGCATCA ACACTGCCGC GGGCAAGAAC
CTGGTGGGGG CCTTCCACCA GCCGCGGGCC GTGGTGGCCG ACCTGGACCT GCTGGGCGGC
CTGCCGACCG ACGACGTGCG TGCGGGCCTG GCCGAGGTCG TCAAGTGCGG CTACATCGAC
TCGGCGGACC TGGACGGGCG GGAGATCCTC GACCTGGTCC GGCAGGGGGC CCGGAGGGGG
GAGGACCCGC GCGACTGGCC CTTCCTGGCC GAGCTCGTGC GCCGCGCGCT GCGGGTGAAG
GCGCGGGCGG TGGCCGCCGA CACCCGGGAG GCCGGCGTGC GGGAGCACCT GAACTTCGGG
CACACCCTGG GCCACGCGCT GGAGAAGCTG GAGGACTACC GCCTGCGCCA CGGCGATGCG
GTGGCGATCG GCATGGTCTA TGGCGCAGCG CTGGGGGAGG AGCTGGACCT GTGGCCCGGG
ACGCAGGAGG TACGCGAGCT GCTCACGGCG GTGGGCCTGC CCACGCACTA TCGCGGCGCG
GCGAGGTGGC CCGAGGTGCG GGCCGCGATG GCCGGGGACA AGAAGGCACG CGCCGGCACC
CTGCGCTTCG TGCTGCTGGC CGAGGCCTGT GAGCCGGTCA CCCGGGAGGT GGCCGACGAG
GAGGCGCTGG AGCGGGCGTG GGGGGCCGTG AGCCCGGCCT GA
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| Protein sequence | MTRRRRREFG WFSHGAPQQA GWHRTGRLPW QRVSLEPTPA EVVLIGPPGV GKSSVAKLLA
GSSRTVIDTD RQVAERAGCS IPEIFERHGQ EHFRALEAEV VREAVTTNGG SLRAGGVVSL
GGGAVMTHAV QEVLREHAAA GRAVIWLQVD PEAMAERLGE GGRPLLAGDP EEALIRWRTL
EAARRDTYAE LATHVIDTTG RPAHEVAAVL RQRLDEPLHG PVAAHAGLRV SVSTSTGQDY
PVAIGHRALR ELPDLLTATG GVPHRALVVH QPDVQDAVES VADTLTALGT QVHRHRIEPA
EPGKSLAGVA GIWEACAGAG LDRHDLLVAV GGGAATDVTG FAAATWMRGV DVVHVPTTLL
AMVDASVGGK TGINTAAGKN LVGAFHQPRA VVADLDLLGG LPTDDVRAGL AEVVKCGYID
SADLDGREIL DLVRQGARRG EDPRDWPFLA ELVRRALRVK ARAVAADTRE AGVREHLNFG
HTLGHALEKL EDYRLRHGDA VAIGMVYGAA LGEELDLWPG TQEVRELLTA VGLPTHYRGA
ARWPEVRAAM AGDKKARAGT LRFVLLAEAC EPVTREVADE EALERAWGAV SPA
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