Gene Ksed_12290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_12290 
Symbol 
ID8372737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1256286 
End bp1257404 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content71% 
IMG OID644991506 
Productphenylalanyl-tRNA synthetase, alpha subunit 
Protein accessionYP_003149029 
Protein GI256825069 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0016] Phenylalanyl-tRNA synthetase alpha subunit 
TIGRFAM ID[TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.0620503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0690527 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGCA CGCCCCCTCC GGACGAGTCC ACCCCCACCC CCCCGAGTGC GCCCGACGCC 
GCGCCCGCGA TCACCCCCGA GGTGGTCGAG GAGCACGTGG CGGCCGGTCT GGCTGCCTTC
GAGGCCGCGT CCACGCTCGA GGAGCTGAAG ACCGCCCGTC TGGCCCACCT GGGCGACAAG
GCCCCGATCT CCCTGGCCAA CCGGAGCATC GGTGGTCTGC CCCCGCAGGA GAAGGCCTCG
GCGGGCAAGC TCGTCGGCAT GGCCAAGGGC CGGCTGAGCA AGGCACTGGC CTCCCGCGAG
GAGGTGCTGC AGGCCGAGCG CGCCGAGCAG ATCCTGGTCG AGGAGACGGT CGACGTGACC
GCCGTGCCCG CCCGCCGCAG TGTGGGCTCC CGCCACCCGG TGGAGCTCAT CCAGCAGCGC
ATGGGCGAGA TCTTCACCGG CCTCGGCTGG GAGATCGGCG AGGGGCCCGA GGTCGAGGCC
GAGTGGTTCA ACTTCGACGC CCTGAACTTC GATGCCGACC ACCCCGCCCG TGCGGAGGCC
GACACCTTCT ACGTCGACCC GCCGGAGCGC CACCTGGTGG TGCGCACGCA CACCTCGCCG
GTCCAGGCCC GGTCCCTGCT GGAGCGGGGC GCGCCGCTGT ACGTGGCGGT CCCCGGCAAG
GTCGGTCGCA CCGACGAGAT CGATGCCACC CACCTGCCGA TCTTCCACCA GATCGAGGGG
CTGGCGGTGG ACAAGGGCCT CACCATGGCC CACCTGCGCG GCACCCTCGA CCACTTCGCC
AAGCAGCTGT TCGGCGAGGG CATCACCACG CGCCTGCGCC CCAACTTCTT CCCGTTCACC
GAGCCCAGCG CGGAGATGGA CTTTCTCTGC CCGGTCTGCC GCTGCGAGGA CGACGCGTGC
CGTACCTGCG GGGGCACGGG CTGGATCGAG TGGGGTGGCT GCGGCATGGT CCACCCCAAC
GTCCTGCGCG CCTGTGGTGT GGATCCCGAG GTGTACTCGG GCTTCGCCTT CGGCATGGGC
GTCGAGCGCG CCCTCATCTT CCGCAACGGG GTGGGGGACC TGCGGGACCT CATCGAGGGG
GACGTCCGCT TCAACACGAA CTTCACGGTG GAGGTCTGA
 
Protein sequence
MPSTPPPDES TPTPPSAPDA APAITPEVVE EHVAAGLAAF EAASTLEELK TARLAHLGDK 
APISLANRSI GGLPPQEKAS AGKLVGMAKG RLSKALASRE EVLQAERAEQ ILVEETVDVT
AVPARRSVGS RHPVELIQQR MGEIFTGLGW EIGEGPEVEA EWFNFDALNF DADHPARAEA
DTFYVDPPER HLVVRTHTSP VQARSLLERG APLYVAVPGK VGRTDEIDAT HLPIFHQIEG
LAVDKGLTMA HLRGTLDHFA KQLFGEGITT RLRPNFFPFT EPSAEMDFLC PVCRCEDDAC
RTCGGTGWIE WGGCGMVHPN VLRACGVDPE VYSGFAFGMG VERALIFRNG VGDLRDLIEG
DVRFNTNFTV EV