Gene Ksed_12270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_12270 
Symbol 
ID8372735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1254871 
End bp1255362 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content69% 
IMG OID644991504 
ProductLSU ribosomal protein L20P 
Protein accessionYP_003149027 
Protein GI256825067 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0292] Ribosomal protein L20 
TIGRFAM ID[TIGR01032] ribosomal protein L20 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.128357 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.140057 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACGCG TGAAGCGGGC AGTCAACGCC CACAAGAAGC GTCGAGTCGT TCTCGAGCGC 
GCCAGCGGTT ACCGCGGTCA GCGTTCGCGT CTCTACCGCA AGGCCAAGGA GCAGGTCACC
CACTCGCTGG TCTACTCGTT CGACCACCGT CGCGACCGGA AGGGTGACTT CCGTCGCCTG
TGGATCCAGC GCATCAACGC TGCGGCCCGC GCCAACGGCA TGACCTACAA CCGCTTCATC
CAGGGCCTGA AGGTCGCTGA GATCGAGGTC GACCGTCGCA TGCTGGCCGA GCTGGCCGTC
AACGACCCGG AGGCGTTCAC CGCCCTGGTC GAGATCTCCC GCGCCAACGT CCCCGCCGTG
AAGGGTGACG AGAGCGCGAC CGCGGGCGCT GCGCCCCGTG GTCAGGAGGC CGCCACCGCC
GCGGCCCAGG CCGGCGACGC CGCCTCCGTC GAGGCGAGCA AGCAGGCCGA GAACGTGGCC
TCCAAGGCCT GA
 
Protein sequence
MARVKRAVNA HKKRRVVLER ASGYRGQRSR LYRKAKEQVT HSLVYSFDHR RDRKGDFRRL 
WIQRINAAAR ANGMTYNRFI QGLKVAEIEV DRRMLAELAV NDPEAFTALV EISRANVPAV
KGDESATAGA APRGQEAATA AAQAGDAASV EASKQAENVA SKA