Gene Ksed_12220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_12220 
Symbol 
ID8372730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1248655 
End bp1251588 
Gene Length2934 bp 
Protein Length977 aa 
Translation table11 
GC content75% 
IMG OID644991499 
Productbifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 
Protein accessionYP_003149022 
Protein GI256825062 
COG category[O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms 
COG ID[COG1391] Glutamine synthetase adenylyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.220356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.263202 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCTGGG TCCTGCGCGA GGGCTTCACC GAGGGGCGCC GGGCCGCGGG GTGCATCGCC 
GACCTGGCGG CCCTGCTGGA CCGGGACGAC CTCCCGCACC ACCTGGGCCT GGCCCGGGCC
CTGGGGCGCG CCGCCGACCC GGACCGCGCC GCCCTGGCCG CGGTCCGCAT CGCCGAGGCG
GCCGATGCGG GGCAGCGCCG CACCTGGGCA CAGCGGATCG ACGCGGCCGA CCCGACCTCC
GTCGAGGGGT CCGCAGCGCG CCTGGTGGCG GTCCTGGGGG CGAGCCGGGC GCTGGGGGAC
CACCTGGTGC GTCACCCCGA GCAGCTCGAC CTCTTCACGG ACCCGGAGCT CCCGGACGAG
CAGGAGTCCC GCGAGGTGCT CCGGGACGCC GTCGAGTCCG CACTGGAGGC GGGGGAGTCC
GGTGACGACG CACTGCGGGT GGCTTACCGG GGGCAGGTGC TGCGCATCGC GGGCATCGAC
CTCACGGCCC CGGACCCCAC CGAGGTGGTC GACCGGGTGG CCGCGGCCCT GGCGGACCTG
GCCGGTGCTG CCCTGGAGGC CGCCCTGGTG ATCGCCCGCC ACGAGGTGCA GGACGCCGAC
GACGTGCGGC TGGCCGTCAT CGCCATGGGC AAGACCGGAG GGCGGGAGCT GAACTACGTC
AGCGACGTCG ACGTCATCTT CGTGGCCGAG CCCGCCGAGG GCGTCGAGGA GGGCCACGCG
CTGCAGGTGG GGGCCCGGTT GGCGACCCGT CTCATGTCCG CCTGCGGCGC CTCGACCGCC
GAGGGCACCC TCTGGCCCGT CGACGCCGCC CTGCGCCCGG AGGGCAAGGC CGGCCCGCTG
GTGCGCACGC TGGAGAGCTT CTCGCAGTAC TACGAGCGGT GGGCCTCCAC CTGGGAGTTC
CAGGCCCTGC TCAAGGCGCG GCCGGTCGCC GGCGACACGG ACCTGGGGCA GGCCTTCGTG
GGCCTCGTGG ACCCCTTGGT CTGGCAGGTC TCCCACCGCG ACGGGTTCGT CGAGGGCGTC
CAGCGCATGC GGCGCCGGGT GGAGGCCCAC ATCCCCGCCG CGGAGGCCAA GCGGCAGCTC
AAGCTCGGCG CGGGTGGGCT GCGGGACATC GAGTTCTCGG TGCAGCTGTT GCAGCTCGTG
CACGGGCGGG TGGACGAGGG CCTGCGCACC GGCAGCACCC TGCCGGGCCT CGCTGCCCTG
GCGGCCGGCG GGTACGTCGC GCGCTCGGAC GCCGCCGTGC TCGACCCCGC TTACCGACTG
CTGCGCTCGC TGGAGCACCG CATCCAGCTC GACCGGTTGC GACGTTCCCA CTTGGTGCCC
ACCGACCCCG ACGACCTGCG CCGCCTGGGC CGCTCGATGG GGTGGTCCAA GGACCCGGCA
CAGGAGGTGG AGCGCCGATG GGGTGAGGTC TCCAAGGAGG TGCGGCGCCT GCACGAGCGG
CTCTTCTACC GTCCCGTGCT GGCCGCCCTG TCGGACCTCA CCGCCTCCCA GGCGCGCATG
ACCCCCGAGG CGGTCACCGA GCGGTTGGCC GCCCTCGGCT TCGCCGACCC GGCGGGCTCG
GTGCGCCACC TGGAGGCCCT CACCAAGGGG GTCTCGCGCA CCGCGGCCAT CCAGCGCCAG
CTCCTGCCGG CCATGCTCGG GTGGTTCGCC AGCTGGCCGG CGCCCGATGC GGGGCTGCTC
GCCTTCCGCC GCATCAGCGA GTCCCTGGGC GGGACCCACT GGTACATGGC CATGTTGCGC
GACGAGGGGC ACGCCGCCGA GCGCTATGCA CACGTGCTGT CCGCCAGCCG CTACCTGACG
AGCCTGCTCG AGCGGGGGCC CGAGGCGGTC CGCCTGCTCG GGGAGCCCGA GGCCCTCGCG
CCCACGGAGC GCGAAAAGAT CCTGTCGCGC ATGTCCAGCG CGGCGAAACG GGCCGAGTCG
GTGGAGGGCG CCGCCCAGGC GGCTCGGGTC CTGCGGCGGA CGGAGATCCT GCGGATGGGC
ATCGGCAGCC TCACCGGGAC GTTGGACGGC GCCCAGGTCT CCGCGGGCCT GACCGCTGCG
GCCGAGGCCC TGCTCGAGGC GGTGCTGCTC CGGGCCCTCG ACGGGGACGC AACCGGGGTG
GCGGTCATCG GGCTGGGGCG GCTCGGCGGT GCGGAGATGG GCTTCGCCAG CGATGCGGAC
CTCTTCGTCG TCCACGACGA CGCACCGGGC CGGGCCGAGG CGGCGACAGC GGCGCTGAAA
ACCCTGCGCA CCACCCTGGC GGGCGGCTCG GAGCCGCCGC TGGAGATCGA CATCGACCTG
CGTCCGGAGG GCAAGAGCGG CCCGACGGTC CGGGGCATCG CGTCGCTGGC GGAGTACTAC
GCCCGGTGGA GCTCCGCGTG GGAGGCCCAG GCGCTGGTGC GGGCGCGCCC GGTCGCGGGG
GACCCGGCGC TGGCCGGTCG GGTGATGGAG CTCATCGACC CGCTCCGCTG GCCGGAGGGT
GGGCTGGTGG AGTCCGCGGT GCGGGAGATG AGGGTGCTCA AGGCGCGCAT GGAGGCCGAG
CGCATCCCAC GGGGCGGGGA CCCCAAGCTC CACCTGAAGC TCGGACGGGG TGGTCTGTCC
GACGTGGAGT GGACGGTGCA GATGCTGCAG ATGCAGCACG CTGCGGCCGA GGAGTCCCTG
CGCACGACCA GCACGGTCGA GGCGCTGGCG GCGCTGCAGG AGCTCGGCCA CGTGACGGGG
GCTGACGCCG AGGCGCTGCG GGGTGCGTGG ACGCTGGCCA GCGACGTGCG GGATGCCAGC
ATGCTGTGGC GGGGTCGTGC CACCGACAGC CTGCCGACCG ACCCCCGGGA CCGTGAGGGG
GTCTCCCGCG CCATGGGGCG CCCGGCAGGT GCCGGTCCGG AGCTCACCGA GGAGTACCTG
CGCCAGGCGC GGCGGGCGCG CGCCATGGTC GAGCGGCTCT TCTACGATTC GTAG
 
Protein sequence
MSWVLREGFT EGRRAAGCIA DLAALLDRDD LPHHLGLARA LGRAADPDRA ALAAVRIAEA 
ADAGQRRTWA QRIDAADPTS VEGSAARLVA VLGASRALGD HLVRHPEQLD LFTDPELPDE
QESREVLRDA VESALEAGES GDDALRVAYR GQVLRIAGID LTAPDPTEVV DRVAAALADL
AGAALEAALV IARHEVQDAD DVRLAVIAMG KTGGRELNYV SDVDVIFVAE PAEGVEEGHA
LQVGARLATR LMSACGASTA EGTLWPVDAA LRPEGKAGPL VRTLESFSQY YERWASTWEF
QALLKARPVA GDTDLGQAFV GLVDPLVWQV SHRDGFVEGV QRMRRRVEAH IPAAEAKRQL
KLGAGGLRDI EFSVQLLQLV HGRVDEGLRT GSTLPGLAAL AAGGYVARSD AAVLDPAYRL
LRSLEHRIQL DRLRRSHLVP TDPDDLRRLG RSMGWSKDPA QEVERRWGEV SKEVRRLHER
LFYRPVLAAL SDLTASQARM TPEAVTERLA ALGFADPAGS VRHLEALTKG VSRTAAIQRQ
LLPAMLGWFA SWPAPDAGLL AFRRISESLG GTHWYMAMLR DEGHAAERYA HVLSASRYLT
SLLERGPEAV RLLGEPEALA PTEREKILSR MSSAAKRAES VEGAAQAARV LRRTEILRMG
IGSLTGTLDG AQVSAGLTAA AEALLEAVLL RALDGDATGV AVIGLGRLGG AEMGFASDAD
LFVVHDDAPG RAEAATAALK TLRTTLAGGS EPPLEIDIDL RPEGKSGPTV RGIASLAEYY
ARWSSAWEAQ ALVRARPVAG DPALAGRVME LIDPLRWPEG GLVESAVREM RVLKARMEAE
RIPRGGDPKL HLKLGRGGLS DVEWTVQMLQ MQHAAAEESL RTTSTVEALA ALQELGHVTG
ADAEALRGAW TLASDVRDAS MLWRGRATDS LPTDPRDREG VSRAMGRPAG AGPELTEEYL
RQARRARAMV ERLFYDS