Gene Ksed_12210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_12210 
Symbol 
ID8372729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1247288 
End bp1248628 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content69% 
IMG OID644991498 
ProductL-glutamine synthetase 
Protein accessionYP_003149021 
Protein GI256825061 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.000380356 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.117276 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGCC AGCAGGAATT CGTCCTCCGC ACCATCGAGG AGCGGGACAT CCGCTTCATG 
CGGCTGTGGT TCACCGACGT GCAGGGCTCC CTGAAGTCCG TGGGGGTGGC GCCGGCCGAG
CTGGAGAACG CCTTCACCGA GGGCATCGGG TTCGACGGCA GCGCCATCGA GGGCTTTGCC
CGCGTCTACG AGGCCGACAC CCTGGCGATG CCGGACGCGT CCACCTTCCA GGTGGTCCCC
TGGCGCGGCG GGGAGGGCGC CGGCATCGGG CGCATGTTCT GTGACATCAC GCTGCCGGAC
GGCACGCCCA GTCCGGCCGA CCCCCGCCAG GTCCTGCGGC GCGCCCTGCA GAAGGCCGAT
GACCTCGGCT TCACCTTCTA CACCCACCCC GAGATCGAGT TCTTCCTCTT CGAGCGTGAC
CTCGATGCCG ACGGCCGGCC CGTCCCCATC GACAACGCGG GCTACTTCGA CCACCTCGCC
CAGGGCGACG GCCACGACTT CCGGCGGGCC GCCATCGACA TGCTCGAGAG CATGGGCATC
CCGGTGGAGT TCTCGCACCA CGAGGGCGCC CCGGGGCAGA ACGAGATCGA CCTGCGCTAC
GCCGATGCGC TCTCGACCGC GGACAACATC ATGACCTTCC GCGCCATCGT GCGCGAGGTG
GCCCTGAGCC AGGAGGCCTT CGCCTCCTTC ATGCCCAAGC CGATGGCGGG CCACCCCGGC
TCGGGCATGC ACACCCACAT CTCCCTGTTC GAGGGCGACC GCAACGCCTT CCACGAGCCG
GGCGCGGAGT ACCAGCTCTC GATCACGGGC CGTCGCTTCG TCGCCGGGCT GCTGCACCAC
GCGCGCGAGA TCAGCGCCAT CACCAACCAG TGGGTGAACT CCTACAAGCG CCTCTGGGGT
GGGGGCGAGG CCCCGGCCCA CGTGTGCTGG GGCCACAACA ACCGCAGTGC GATGGTCCGC
ATCCCCATGT ACAAGCCCAC CAAGGTGCAG TCGAGCCGCA TCGAGCTGCG CACCTTGGAC
TCGGCCTGCA ACCCCTACCT GGCCTACGCG GTCGTGCTGG CAGCCGGCCT GAAGGGCATC
GAGGAGGAGT ACGAGCTCCC CGCGGAGGCC GAGGACGACG TGTGGGGCCT GACCGACGGG
GAGCGCCGGG CACTGGGCAT CCAGCCGCTG CCGTCCTCCC TGAGCGAGGC GATCGCGGCG
ATGGAGGAGT CCGAGCTCGT CGCCGAGACC CTCGGCGAGC ACGTCTTCGA CTACTTCCTG
CGCAACAAGC GGGAGGAGTG GCTGGCGTAC CGGGCGCAGG TGACGCCCTA CGAGCTCGAC
CGCTACCTGC GCCAGCTGTG A
 
Protein sequence
MDRQQEFVLR TIEERDIRFM RLWFTDVQGS LKSVGVAPAE LENAFTEGIG FDGSAIEGFA 
RVYEADTLAM PDASTFQVVP WRGGEGAGIG RMFCDITLPD GTPSPADPRQ VLRRALQKAD
DLGFTFYTHP EIEFFLFERD LDADGRPVPI DNAGYFDHLA QGDGHDFRRA AIDMLESMGI
PVEFSHHEGA PGQNEIDLRY ADALSTADNI MTFRAIVREV ALSQEAFASF MPKPMAGHPG
SGMHTHISLF EGDRNAFHEP GAEYQLSITG RRFVAGLLHH AREISAITNQ WVNSYKRLWG
GGEAPAHVCW GHNNRSAMVR IPMYKPTKVQ SSRIELRTLD SACNPYLAYA VVLAAGLKGI
EEEYELPAEA EDDVWGLTDG ERRALGIQPL PSSLSEAIAA MEESELVAET LGEHVFDYFL
RNKREEWLAY RAQVTPYELD RYLRQL