Gene Ksed_12030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_12030 
Symbol 
ID8372711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1227197 
End bp1228387 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content73% 
IMG OID644991481 
Product(acyl-carrier-protein) S-malonyltransferase 
Protein accessionYP_003149005 
Protein GI256825045 
COG category[I] Lipid transport and metabolism 
COG ID[COG0331] (acyl-carrier-protein) S-malonyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.0560338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0843722 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTGCGA TCGTCTGCCC TGGACAGGGC GCTCAGTCCC CCGGCTTCCT CGCCCCCTGG 
CTCGAGCTGC CCGGTTTCGC CGACCGGATG GCGTGGCTCT CCGCGTGTGC GGGGATCGAC
CTGGTGGCTC ACGGCACCAC CTCGGACGCG GACACCATCC GTGACACGGC CGTGGCCCAG
CCGCTCATCG TCGGCTCCGG CCTGGTGAGC TTCCTGGCCC TCTTCGACCA CCCCGCCGAC
GCCTACCGGA CGGTGCGCGT GGGGGCCGGT CACAGCGTCG GGGAGATCAC CGCCGCCGTC
GGCACCGGCG TCCTCAGCGC CGAGCAGGCC ATGGTCTTCG TGCGGGCCCG GGGCCAGGGC
ATGGCCGAGG CCTCGGCCCG CACGCCCACC TCCATGCGGG CCGTCGTCGG CGGTGACCGC
GACGAGGTCG TGGCCGCCAT CGAGGCCGCG GGGCTGACCG CGGCCAACCA GAACGGCGCG
AACCAGGTGG TCGCTGCGGG CACGGTCGAG CAGCTCGAGG CCTTCGCGGC CCAGCCGCCG
GCCCGCACCC GCGTGATCCC GCTGCAGGTC GCCGGGGCCT TCCACACCGA GCACATGAGC
CCGGCCGTCG AGACCCTGGC CGGCTACGCC CGTGCCATGA GTACCCACGA CGCCCGCATC
GACCTCGTCT CCAACGCCGA CGGCTCGGTG CTGCGCTCGG GGCGCGAGGT GCTCACCCGC
CTGGTGACCC AGGTCTCGCG CCCGGTGCGT TGGGACCTGT GCATGGACGC CTTCGCCGAC
ATGGGGATCA CCGGCGTCAT CGAGATCCCG CCGGCCGGCA CGCTGACGGG CCTGGTCAAG
AAGCACCTCA AGGGCGTCGA GGCCCTCGCG CTCAAGACCC CCGACGACCT CGAGGCGGCC
CGGCGCATGA TCGCCGAGCA CGGTGAGGAC CGGTCCGAGG GCACCGACCA CCCGACCTGG
CGGATGCTCG TCTCCCCCGC CAAGGGGACC GTCGACCTCG CCTGCTGTGA CAAGGGCGAG
GGCGGGCGTT TCGCGGCGGG CGACCAGCTC GCCACGGTTC GCGCACTGCG CGAGGAGGTG
CCCGTCGTGG CCACCCACGG TGGGCAGATC GTCGAGTGGC TCGTCCAGGA CGGCGACCCG
GTGGCCCCCG GACAGCCGAT CGTCCGGATC CACCCCAGCC AGGAGGACTG A
 
Protein sequence
MLAIVCPGQG AQSPGFLAPW LELPGFADRM AWLSACAGID LVAHGTTSDA DTIRDTAVAQ 
PLIVGSGLVS FLALFDHPAD AYRTVRVGAG HSVGEITAAV GTGVLSAEQA MVFVRARGQG
MAEASARTPT SMRAVVGGDR DEVVAAIEAA GLTAANQNGA NQVVAAGTVE QLEAFAAQPP
ARTRVIPLQV AGAFHTEHMS PAVETLAGYA RAMSTHDARI DLVSNADGSV LRSGREVLTR
LVTQVSRPVR WDLCMDAFAD MGITGVIEIP PAGTLTGLVK KHLKGVEALA LKTPDDLEAA
RRMIAEHGED RSEGTDHPTW RMLVSPAKGT VDLACCDKGE GGRFAAGDQL ATVRALREEV
PVVATHGGQI VEWLVQDGDP VAPGQPIVRI HPSQED