Gene Ksed_11940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_11940 
Symbol 
ID8372702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1220589 
End bp1221692 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content74% 
IMG OID644991472 
Productglycosyltransferase 
Protein accessionYP_003148997 
Protein GI256825037 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.0997293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0817193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCATCG TCCGCATCGC CAACTTCGTG AGCCCCACCT CCGGGGGCAT CCGTACCGCG 
CTGCGCCACT GGGGTGAGGA GTACCGGGCC GCCGGCCACG AGGTGCACCT GGTGATCCCC
GAGCCGGGCG CTCGCCACGA GGTGCAGGCC CAGGGACACG TGCACCACCT GCCCGCCACC
GGCACCGGCG CGGGATACTC CCTGATGTGG GCACGGCGCC CGGTCGCGCG TCTGCTGCGC
GAGATCGGAC CGGACCGCCT CGAGGTGCAC GACCGCGCCA CCCTGCGCTG GCTCGGGCCG
TGGGCGCGCA AGCAGGGCAT CCCGACGGTG ATGCTCAGCC ACGAGAACAT GACCGGCATC
CTGGTGCGCC GCCTGCACTC CCCCGAGGCG CTCGCCGAGC GCACCGCCGA CTTCATCAAC
CGGAAGTCCG CGAACGACTA CGACCGCATC GTCTGCCCCA GTCACTACGC CGCCGCGGAG
TGGCGCCGCT TCGGCGCGGA CGCCCGGGTG GTGACGCTCG GGGTGGACCT CGAGTCCTTC
CAGCCGCCCA CCGAGCGCTC CCCTCTCACC CCGGATGGCC GGACCCGCCC GCCGGGCCAG
GTGCAGGTCG TCCACTGTGG GCGCCTGTCG CCGGAGAAGA ACCCGGGGCT GTCCATCGAT
GCGGTGCGCG AGCTCGTGCG CCGCGGCGTG GACGTCCACC TCACGGTGCT CGGCCACGGC
CCGATGCGCG AGGAGCTCAT GGAGTCCTCC GCCGACCTCC CGATCACCTT CCACGAGTAC
ATCTCCGGCC GGCGCGAGCT CGCCGACGTG CTGGGGCGCG CCGACCTGGC CATCTCCCCC
GGCCCCGTGG AGACCTTCGG CCTCGCGGCG CTGGAGGCCC TCGCGTGCGG CGTCCCGGTC
GTGTGCCCGG ACGAGGGCGC CCTGGCCGAG GTCGTCGGCC CGGCCGGCGC CGTGGCCCCC
TCGCGCCCGG AGGCCTTCGC GGACGCAGCC CAGGAGGTCC TCGCCCGAGG CGACCTCACC
GACGTCGCAC GCACGCAGGC CGAGCGCTTC AACTGGCCGG ACTCGGCCGC CCAGATGCTG
GCCATCCACC ACGAGCTCGG CTGA
 
Protein sequence
MRIVRIANFV SPTSGGIRTA LRHWGEEYRA AGHEVHLVIP EPGARHEVQA QGHVHHLPAT 
GTGAGYSLMW ARRPVARLLR EIGPDRLEVH DRATLRWLGP WARKQGIPTV MLSHENMTGI
LVRRLHSPEA LAERTADFIN RKSANDYDRI VCPSHYAAAE WRRFGADARV VTLGVDLESF
QPPTERSPLT PDGRTRPPGQ VQVVHCGRLS PEKNPGLSID AVRELVRRGV DVHLTVLGHG
PMREELMESS ADLPITFHEY ISGRRELADV LGRADLAISP GPVETFGLAA LEALACGVPV
VCPDEGALAE VVGPAGAVAP SRPEAFADAA QEVLARGDLT DVARTQAERF NWPDSAAQML
AIHHELG