Gene Ksed_11890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_11890 
Symbol 
ID8372697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1215401 
End bp1216429 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content71% 
IMG OID644991467 
Productpredicted oxidoreductase, aryl-alcohol dehydrogenase like protein 
Protein accessionYP_003148993 
Protein GI256825033 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.018283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.630679 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATACC CCCGCCTCGG ACACAGTGGA CTGCGCGTCT CGGAACTCAT CTACGGCAAC 
TGGTTGACCC ACGCCTCCCA GGTGGAGGCC GAGCAGGCCG AGGCCTGCGT GCGGGCCGCC
CTGGATGCCG GGATCACCAC CTTCGACACC GCCGACACCT ACGCGAACAC CGAGGCGGAG
AGGGTCCTCG GCAAGGCGCT GGCCGGTGAG CGCCGCGAGG GGCTGGTGAT CGCCACCAAG
GTGTTCTGGC CGACTCGCCC CGACGGCGCG CCCCAGGACC AGGCCGGCCC GAACGACCAC
GGTCTGTCAC GCAAGCACGT CACCGAGTCC CTCCACGCGT CGCTGCGCCG TCTGGGCACC
GACTACGTCG ACCTCTACCA GTGCCACCGC TTCGACCACG ACACCCCGTT GGAGGAGACG
ATGGAGGCCC TGGCCGACCT CGTCCACGCG GGCAAGGTGC ACTACGTGGG CGTCTCGGAG
TGGACCGCCG ACCAGATCCG CCGCGGCCAT GCCCTGGCGC GGGAGCTGCG CATCCCCTTC
GTCTCCAACC AGCCCCAGTA CAACCTCCTG TGGCGCGTCA TCGAACCGGA GGTCGTCCCC
GTCTGTGAGG AGCTCGGCGT CCAGCAGATC GTGTGGTCGC CGCTCGCACA GGGGGTGCTC
ACCGGCAAGT ACCAGCCCGG CGCCCAGGCC CCCGAGGGCA GCCGCGCCGC CTCGGCCGAG
GTCTCCGGCT CCATGCAGCA CCTGCTGAAG GACTCGCTGC TGGAGAAGGT GCAGCAGGTC
GGGGCGCTGG CCGACGAGGC CGGCATGAAG CTCTCCCACC TGGCCCTGGC CTGGGTCCTG
CGCAACCCGA ACGTCTGCTC GGCCATCGTG GGCGCCTCGC GTCCCGAGCA GGTGACCGAC
AACGTGCGGG CGCTGCAGGT GACGCTCGAG GACGACCTCG TGGCCCGCGT CGACGAGGTG
CTGGGCGATG CCGTCAAGGA CGACCCGACG CTGACGGTCT CCCCCCACCG GCTGCGCGAC
TTCGCCTGA
 
Protein sequence
MEYPRLGHSG LRVSELIYGN WLTHASQVEA EQAEACVRAA LDAGITTFDT ADTYANTEAE 
RVLGKALAGE RREGLVIATK VFWPTRPDGA PQDQAGPNDH GLSRKHVTES LHASLRRLGT
DYVDLYQCHR FDHDTPLEET MEALADLVHA GKVHYVGVSE WTADQIRRGH ALARELRIPF
VSNQPQYNLL WRVIEPEVVP VCEELGVQQI VWSPLAQGVL TGKYQPGAQA PEGSRAASAE
VSGSMQHLLK DSLLEKVQQV GALADEAGMK LSHLALAWVL RNPNVCSAIV GASRPEQVTD
NVRALQVTLE DDLVARVDEV LGDAVKDDPT LTVSPHRLRD FA