Gene Ksed_11820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_11820 
Symbol 
ID8372690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1208245 
End bp1208931 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content75% 
IMG OID644991460 
ProductATPase component of Mn/Zn ABC-type transporter 
Protein accessionYP_003148986 
Protein GI256825026 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.00325557 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.587346 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGAGG CCCTGACACT CGACGGCGCG GTCTACGGGC ACGACGGGCA CCCTGCTGTC 
GGCCCGGTGG ACCTCCGCAT CCCTGCCGGG CAGAGCGTGG CCCTGACTGG CCCCAACGGG
TCCGGCAAGA GCACCCTGGC CCGGGGGCTG CTCGGGCTCA ACGACCACCT GGCCGGCACG
GCGACCCTGC TGGGCACGCC CCTGCGGCAG CTCCAGGACC GCACCCGCAT CGGCTACGTC
CCGCAGCACC ACACGGTCGC CGACCGGATC CACGCCACCG TGGGCGAGGT GATCCTGGCC
GGGCGCGTCC CCGCCCTCCC CTGGTGGCGC CGTCCCGGCC GCGCCGACCG GGAGGCAACG
GCGCGCGCGG CGGCGGACGT CGGGCTCGAC GACCGCCTGC ACCACAACCT CGCCGACCTC
TCCGGGGGTC AACGTCGGCG GGCCCTGCTG GCCCGGGCCC TGGTGAGCCA GCCGGACCTG
GTGATCCTGG ACGAGCCGAC CGCCGGGGTC GACCTGGCCA ACCAGCGCCT GCTGGCCCAC
CTGCTGCGGC GACTGGGCCA GGGAGGGTTG ACGATGCTGG TGGTCACGCA CGAGCTGGAC
CCCCTGGCCG ACGCCCTGGA CCGTGTACTC ACCCTGACCG GGGGGCGCCT GACCGACGAC
CGCGCGATGG AGGCCCCGCA TGGCTGA
 
Protein sequence
MREALTLDGA VYGHDGHPAV GPVDLRIPAG QSVALTGPNG SGKSTLARGL LGLNDHLAGT 
ATLLGTPLRQ LQDRTRIGYV PQHHTVADRI HATVGEVILA GRVPALPWWR RPGRADREAT
ARAAADVGLD DRLHHNLADL SGGQRRRALL ARALVSQPDL VILDEPTAGV DLANQRLLAH
LLRRLGQGGL TMLVVTHELD PLADALDRVL TLTGGRLTDD RAMEAPHG