Gene Ksed_11810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_11810 
Symbol 
ID8372689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1207260 
End bp1208252 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content71% 
IMG OID644991459 
ProductABC-type Mn2+/Zn2+ transport system, permease component 
Protein accessionYP_003148985 
Protein GI256825025 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.00721282 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.650554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGA TGCTCCAGTT CGAGTTCATG CAGCGCGCCC TCCTGGCCGC GCTGCTCGTC 
GGCGTCGTCG CCCCCATGGT GGGCATCTTC ATCGTGCAGC GCGGGCTGAG CATGATCGGC
GACGCGCTGG GCCACGTGGC CCTGGCCGGC GTCGGCATCG GGCTGGTGAT GCACACGCAG
CCCGTCTGGT CGGCCCTGGT GGTCGCGGTC GCCGCGGCCC TCCTCATCGA GACGCTCCGC
GCGCGCGGCG GAACCGGCAG CGACGTGGTG ATCGCGCTGA TGCTGCACGC GGGCATCGCG
CTGGGTGTGG TGCTCCTGAG CACCAGCCCG GCCGCAGGTG GAGCAGGCCT GGAGAACTAC
CTGTTCGGTG CGATCACCAC CACCACACGC GCGGACCTCG TGACCTTCGC CGTCCTCGGG
CTGGTGGTGG TGGCGGCCAC CACGCTGCTG CGTCCGCGGC TGTTCGCCGT GGCGCAGGAC
GAGGAGTACA GCCGCTCCCA GGGGCTCCCG GTGACCGCGC TGAACATGCT CCTGTCCGCC
CTGGTGGCGG TGACGATCGT GATGTCGATG CGGGTGGTCG GGCTGCTGCT GATCTCGGCC
CTGATGGTGG TGCCCAACGC AGCGGCCCAG CGGCTCACCC GCGGATTCGC GGCCGCGTGG
TGGTGCGCCA TCGCCATCGG TGCCGTCTCG GCCGTGGGCG GCGTGACCCT CAGCTACAGC
CACGACCTCC CCTCCGGAGG GACCATCGTG CTGGTCACCG TGGCGATCTA CGCCGCGGTG
ATCGTCGCCA CCGAGGTGAT GCACCGGGTG CGCATCGGCC GCCACCGGCG CGCCACCACC
AACGAGCACC ACGAGCACGA GCACCACCCG GACTGTGGCC ACACCCCCGT CCCCCACGGC
GACCACGTGG ACTACCTTCA CGGGGACCAC CTGCACCACC CCCACGCGGG GCACTACGAC
GAACGACCGC TCGATGCCGA GGAGGCCCGA TGA
 
Protein sequence
MAEMLQFEFM QRALLAALLV GVVAPMVGIF IVQRGLSMIG DALGHVALAG VGIGLVMHTQ 
PVWSALVVAV AAALLIETLR ARGGTGSDVV IALMLHAGIA LGVVLLSTSP AAGGAGLENY
LFGAITTTTR ADLVTFAVLG LVVVAATTLL RPRLFAVAQD EEYSRSQGLP VTALNMLLSA
LVAVTIVMSM RVVGLLLISA LMVVPNAAAQ RLTRGFAAAW WCAIAIGAVS AVGGVTLSYS
HDLPSGGTIV LVTVAIYAAV IVATEVMHRV RIGRHRRATT NEHHEHEHHP DCGHTPVPHG
DHVDYLHGDH LHHPHAGHYD ERPLDAEEAR