Gene Ksed_11780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_11780 
Symbol 
ID8372686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1205266 
End bp1206105 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content75% 
IMG OID644991456 
ProductDNA replication and repair protein RecO 
Protein accessionYP_003148982 
Protein GI256825022 
COG category[L] Replication, recombination and repair 
COG ID[COG1381] Recombinational DNA repair protein (RecF pathway) 
TIGRFAM ID[TIGR00613] DNA repair protein RecO 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.106558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTCT ACCGCGACGC CGCCATCGTG CTGCGCACGC ACCCCCTGGG TGAGGCCGAC 
CGCATCGTGA CCCTCTTGGG CCACCAGCGG GGCAAGGTGC GGGCCGTGGC CAAGGGGGTG
CGGCGCACGC GCTCCCGGTT CGGTGCGCGG CTCGAGCCGG CAATGGTGGT CGACGTGCAG
TGCTACGAGG GCCGCACCCT CGACACGATC ACCCAGGCCG AGGGGCTGGC GGCCTACGGC
GAGGCGATCG CGCGGGACTA CCCCCGGTGG GTCTGCTCCA CGGTGATGTG CGAGACCGCT
GACAGCCTGG TGGACGAGGG GGAGACCTCC CCGCAGCAGT TCCGCCTCCT GGCCGGGGCC
CTGTCCGCCC TGGCAGTGGG CCAGTGGCCC GCCGACCTCC TGCTGGACGG GTACCTGCTG
CGCGCCATGG CGATCGCCGG GTGGCCGATG ATGGCGCGCG ACTGTGCGCG GTGCGGCGCT
CCCGGCCCGC ACCGCGCGTT CCACGTGGCC GCCGGGGGAG CGGTGTGCCC CAGCTGCCGG
ACGGCCGGCG CCGAGGCCCC GCACCCGGAC AGCTTCACGA TGCTGCACGC GCTGGGGGAG
TCCGACTGGG GCACGGTCCG TGGTCTGCTG GGTGGCGCCC GGTCCGATGC GTGCCGGCGC
GAGGTGCACT CCCTGGTGAC CGGGCACGTG CAGTGGCACA CCGAGCGCAA CGTCCGCTCG
GTGCGGCACC TGGACCTGGA GGACCTGCTC TCCCGCGAGC CCAGCAGCGG ACCCGCGGCC
GCCCCCGACC AGACAGCCCC CGACCAGCCC GTCCCGTCCC ACACCACCCC CGGAGCCTGA
 
Protein sequence
MPLYRDAAIV LRTHPLGEAD RIVTLLGHQR GKVRAVAKGV RRTRSRFGAR LEPAMVVDVQ 
CYEGRTLDTI TQAEGLAAYG EAIARDYPRW VCSTVMCETA DSLVDEGETS PQQFRLLAGA
LSALAVGQWP ADLLLDGYLL RAMAIAGWPM MARDCARCGA PGPHRAFHVA AGGAVCPSCR
TAGAEAPHPD SFTMLHALGE SDWGTVRGLL GGARSDACRR EVHSLVTGHV QWHTERNVRS
VRHLDLEDLL SREPSSGPAA APDQTAPDQP VPSHTTPGA