Gene Ksed_11710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_11710 
Symbol 
ID8372679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1199345 
End bp1200106 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content75% 
IMG OID644991449 
Productconserved hypothetical protein TIGR00046 
Protein accessionYP_003148975 
Protein GI256825015 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.444183 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.98437 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTTC CCCTCTTCGT GGCCGATGGG CCCCTGGCGC CGGTGGGCGG GTCGCTGGTG 
CTCACCGGTG AAGAGGGACG GCACGCCGCC ACCGTCCAAC GCATCGCGGT GGGCGAGCAG
GTGCTGGTCA CCGACGGTGC GGGGGCCGGT GTGCGGGGCG AGGTCCTCGC CACCGCGAAG
GACCGGCTCG AGCTGCGCGT CCTGGAGGAG CTCGCCGAGC CGGAGCCCCG CCCGCGGCTG
GAGCTCGTGC AGGCCCTGGC CAAGAGCGGC CGCGCTGAGC AGTCGATCGA GACCAGCGTC
GAGATCGGGG TCGACCACGT CCTGCCCTGG GAGGCCGAGC GCAGCATCAG CCGGTGGTCC
GGCCCCAAGG CCGCCAAGGG GCGGGCGAAG TGGGCCGGCG TGGTCCGCGC AGCCACCAAG
CAGTCGCGAC GCCTCCGCGA GGCCGAGGTG GCCGAGCTGG TCTCCAGCGC GGGCCTGGCC
CGCCGCATCG AGGAGGGCGC GCGGGAGGGC GAGCTGACGC TCGTGCTCCA CGAGGTGGCC
ACCGACCGCC TGCTCCCGGT GCTCACGGGC CTGGTGGGTG ACGGCCCCGT GCCGCCGGTG
GTGCGGGTCG TGATCGGCCC CGAGGGCGGC ATCAGCCCCC GGGAGCTCGA GCTGTTCACC
GAGGCCGGTG GTCACCCGGT GCTGCTGGGG CCGCACGTCC TGCGGACCTC GTCAGCCGGC
CCGGTGGCCC TGTCGCTCGT CGCCGGCGCG CTGCGTTGGT GA
 
Protein sequence
MTLPLFVADG PLAPVGGSLV LTGEEGRHAA TVQRIAVGEQ VLVTDGAGAG VRGEVLATAK 
DRLELRVLEE LAEPEPRPRL ELVQALAKSG RAEQSIETSV EIGVDHVLPW EAERSISRWS
GPKAAKGRAK WAGVVRAATK QSRRLREAEV AELVSSAGLA RRIEEGAREG ELTLVLHEVA
TDRLLPVLTG LVGDGPVPPV VRVVIGPEGG ISPRELELFT EAGGHPVLLG PHVLRTSSAG
PVALSLVAGA LRW