| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_11340 |
|---|
| Symbol | |
|---|
| ID | 8372642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 1159973 |
|---|
| End bp | 1160749 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644991412 |
|---|
| Product | amino acid ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_003148939 |
|---|
| Protein GI | 256824979 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 0.571361 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCCC ACCGCCAGCT TCACCCCACC CAGGACCTGG ACACCAACGC CCCGGCGATC
AGCATCCGCG GCCTGCACAA GAGCTTTGGC GAGGTCAAGG TGCTCGAGGG CATCGACCTC
GACGTGCACC GCGGTCAGGT GGTCTGCGTC ATCGGGCCCT CGGGGTCCGG CAAGTCGACC
CTGCTGCGGT GCGTGAACCG CCTCGAGGAG CCCACCGCCG GGCAGATCCT CATCGAGGGC
GTGGACATCA CCGACCCGGA CACCGAGCTC GATGCGGTGC GCTCCCGCAT CGGCATGGTG
TTCCAGTCGT TCAACCTGTT CAGCCACATG TCGGTGCTGC GCAATCTCAC CCTCGCACAG
CAGAAGGTGA AGCGCCGCGG GCGCAAGGAA GCCGTGGCGA TCGCGATGGA GAACCTCGAG
CGCGTGGGCC TGGCCCACCG GGCCGAGGCC CACCCCTCGC AGCTGTCCGG CGGTCAGCAG
CAGCGCGTCG CCATCGCCCG CGCGCTGTCG ATGAACCCGG ACATGATGCT GTTCGACGAG
CCCACCAGCG CCCTGGACCC CGAGCTGGTG GGTGACGTGC TGGACTCGAT GAAGGACCTC
GCGCGCGAGG GCATGACGAT GATGGTGGTG ACCCACGAGA TGGGCTTCGC CCGCGAGGTG
GGCGACCACC TGGTCTTCAT GGCCGGCGGC GACATCGTGG AGCAGGGAGA CCCCCGCCAG
GTGCTGGGCA ACCCGGGGCA CGAACGCACC CAGGACTTCC TGGCCAAAGT GCTCTGA
|
|---|
| Protein sequence | MTSHRQLHPT QDLDTNAPAI SIRGLHKSFG EVKVLEGIDL DVHRGQVVCV IGPSGSGKST
LLRCVNRLEE PTAGQILIEG VDITDPDTEL DAVRSRIGMV FQSFNLFSHM SVLRNLTLAQ
QKVKRRGRKE AVAIAMENLE RVGLAHRAEA HPSQLSGGQQ QRVAIARALS MNPDMMLFDE
PTSALDPELV GDVLDSMKDL AREGMTMMVV THEMGFAREV GDHLVFMAGG DIVEQGDPRQ
VLGNPGHERT QDFLAKVL
|
|---|
| |