| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_11320 |
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| Symbol | ispG |
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| ID | 8372640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | + |
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| Start bp | 1158557 |
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| End bp | 1159696 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644991410 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_003148937 |
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| Protein GI | 256824977 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 0.564076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCAC CTGTCCCGCA GACCGTGGCG CCGCGCCGAA AGAGTCGCAA GATCAAGGTC
GGCAGCACCT TCGTGGGTGG CGACGCGCCG GTCACCGTGC AGACGATGAC CACCACCAAG
ACCTCCGACA TCAACGGCAC CCTGCAGCAG ATCGCCGAGC TGACCGCGGC CGGCTGCGAC
ATCGTGCGCG TGGCCTGCCC CACCCAGGAC GATGCGGACG CGCTGCCGAT CATCGCGCGC
AAGTCGCAGA TCCCGGTGAT CGCCGACATC CACTTCCAGC CCAAGTACGT GTTCGCCGCC
ATCGATGCGG GGTGCGCCGC GGTGCGCGTG AACCCGGGCA ACATCCGCAA GTTCGACGAC
CAGGTGGGCG CGATCTCCCG GGCCGCCAAG GACGCCGGCG TCTCGCTGCG GATCGGTGTG
AACGCCGGCT CGCTCGACCA GCGCCTGTAC GACAAGTACG GCAAGCCCAC CGCCGAGGCC
CTGGTGGAGT CGGCCGTGTG GGAGGCCAGC CTCTTCGAGG AGCACGACTT CCATGACTTC
AAGATCTCGG TCAAGCACAA CGACCCGGTG GTCATGATCC GGGCCTACGA GATGCTCGCC
GAGCGCGGTG ACTGGCCCCT GCACCTGGGC GTGACCGAGG CCGGTCCGGC CTTCCAGGGC
ACCATCAAGT CGGCCACCGC CTTCGGGGCG CTGCTCGCCA AGGGCATCGG CGACACCATC
CGCGTGAGCC TCTCGGCCCC GCCGGTGGAG GAGGTGAAGG TCGGCACCCA GATCCTGCAG
GCGCTGAACC TGCGCCCCCG CAAGCTCGAG ATCGTCTCCT GCCCCTCCTG TGGGCGTGCG
CAGGTGGACG TCTACAAGCT GGCCGATGAG GTGACCGCCG GTCTGGAGGG CATGACCGTG
CCGCTGCGGG TGGCCGTGAT GGGCTGCGTC GTGAACGGTC CGGGCGAGGC CCGCGAGGCC
GACCTGGGCG TGGCCTCGGG CAACGGCAAG GGTCAGATCT TCGTCAAGGG CGAGGTCATC
AAGACCGTGC CGGAGAGCCA GATCGTCGAG ACCCTCATCG AGGAGGCGAT GCGGATCGCC
GAGGACATGG GCGAACCCGT CGACGGCGTG GAGGGGCAGC CCACCGTCAG CGTCGGCTGA
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| Protein sequence | MPAPVPQTVA PRRKSRKIKV GSTFVGGDAP VTVQTMTTTK TSDINGTLQQ IAELTAAGCD
IVRVACPTQD DADALPIIAR KSQIPVIADI HFQPKYVFAA IDAGCAAVRV NPGNIRKFDD
QVGAISRAAK DAGVSLRIGV NAGSLDQRLY DKYGKPTAEA LVESAVWEAS LFEEHDFHDF
KISVKHNDPV VMIRAYEMLA ERGDWPLHLG VTEAGPAFQG TIKSATAFGA LLAKGIGDTI
RVSLSAPPVE EVKVGTQILQ ALNLRPRKLE IVSCPSCGRA QVDVYKLADE VTAGLEGMTV
PLRVAVMGCV VNGPGEAREA DLGVASGNGK GQIFVKGEVI KTVPESQIVE TLIEEAMRIA
EDMGEPVDGV EGQPTVSVG
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