Gene Ksed_11290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_11290 
Symbol 
ID8372637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1154964 
End bp1155923 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content74% 
IMG OID644991407 
Productlysozyme M1 (1,4-beta-N-acetylmuramidase) 
Protein accessionYP_003148934 
Protein GI256824974 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.0558927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACACG CTTCCCCGAC CCACCGCACT GCCCCGACCC ACCGCCCTGC CACCGCCCGG 
TCGCACCGCC GCCTCGGCGG AGCAACCGTG CTGGCAGCGG GCCTGCTCCT GCCCACCCTC
GCCGCCGGGC CGGCACAGGC CCAGCCCGAC AGCACGCCGC CGGCCCCTTC CGACCACGCG
TCCGAGCAGG GCATCGACGG CCCCGGTGAG GCCACGATGG GGTGGAGCCT CCAGGACGGG
ACCGGCCCCG CGGCCGGCGC CCCCGGCCAG CACCTCGGGC CGCTGGGCAC CGGGACCGCG
ATCGACCCTG CCGTCGAGGC CGCCCACGGT CCCTACGGCA TCGACACCAG CAGCCACACC
ACCGTGCAGG ACTGGCAGTG GTTCTCCGCC GTGGGGGCGG AGTTCGCGTG GGTCAAGGCC
ACTGAGGGGG ACTACTACAC CAGCCCCGTC TTCAGCGCGC AGTACACCGG CGCCACGGAG
CAGCAGATGG TCCGTGGCGC CTACCACTTC GCCAACCCGG CGGAGTCCTC CGGCGCCCAC
CAGGCGGAGT TCTTCGTGGC GAACGGGGGT GGCTGGAGCG CGGACGGCCG CACCCTGCCG
GGGGCGCTGG ACATGGAGTA CAACCCCTAC GGCCCGGTCT GCTACGGGCT GGACCACGCG
CAGATGGACG CCTGGATGCG CGACTTCGTC GGCCGCTACC AGCAGCTGAC GGGCGTCAAG
CCGGTCATCT ACACCAACGC TGACTGGTGG AACACCTGCG TGGGCCGGGC CGACTACTCC
GACGTGCACC TCTGGCTGGC GCGCTACGAC GCCACCCCCG GCACCGCACC GTGGTCGTGG
TCGGACCACG GGGCCAGCCA CACCGTCTGG CAGACCCGCC CGGTCACGGA CAAGGGGTAC
GACGTGAACC GCTTCCACGG CGACCGCGCC GCGCTGCAGG AGCTCGCCGC CGGCCGCTGA
 
Protein sequence
MRHASPTHRT APTHRPATAR SHRRLGGATV LAAGLLLPTL AAGPAQAQPD STPPAPSDHA 
SEQGIDGPGE ATMGWSLQDG TGPAAGAPGQ HLGPLGTGTA IDPAVEAAHG PYGIDTSSHT
TVQDWQWFSA VGAEFAWVKA TEGDYYTSPV FSAQYTGATE QQMVRGAYHF ANPAESSGAH
QAEFFVANGG GWSADGRTLP GALDMEYNPY GPVCYGLDHA QMDAWMRDFV GRYQQLTGVK
PVIYTNADWW NTCVGRADYS DVHLWLARYD ATPGTAPWSW SDHGASHTVW QTRPVTDKGY
DVNRFHGDRA ALQELAAGR