Gene Ksed_11140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_11140 
Symbol 
ID8372622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1137887 
End bp1138249 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content75% 
IMG OID644991392 
Productpredicted endonuclease related to Holliday junction resolvase 
Protein accessionYP_003148919 
Protein GI256824959 
COG category[L] Replication, recombination and repair 
COG ID[COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.0330886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.323386 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGTG AACGGAGGAC CCTGGGGCGG CGCGGGGAGG ACATCGCCGC CCGGTGGTGG 
CAGGAGCGCG GGGCCCGCGT CCTGGAGCGC AACTGGCGCC ACCGACTCGG AGAGATCGAC
CTGGTGGTGA CCAGCGGCCC CCGGCTGGTG GTGTGCGAGG TGAAGACCCG CTCCACCGTC
GCCTTCGGGC AGCCGGTCGA GATGGTCGCC CTGCCCCAGC GCCGACGCCT GCGGCGGCTG
ACGGCCGCGT GGCTGCAGGA GCACCCGGGG CGCTGGGCCG AGGTCCGCAT CGACGTGATC
GGGGTCCTCC TGCCGCCGGG CGGACCGGCC ACCGTGCAGC ACGTGCCCGG AGCGGTCTCG
TGA
 
Protein sequence
MTRERRTLGR RGEDIAARWW QERGARVLER NWRHRLGEID LVVTSGPRLV VCEVKTRSTV 
AFGQPVEMVA LPQRRRLRRL TAAWLQEHPG RWAEVRIDVI GVLLPPGGPA TVQHVPGAVS