Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_10860 |
Symbol | |
ID | 8372594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 1109737 |
End bp | 1110423 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644991366 |
Product | RNAse III |
Protein accession | YP_003148893 |
Protein GI | 256824933 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.0129939 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.199787 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGGAGC TCGCCGCACG GTTGGAGGAG GTCGTCGGCG TCCCGGTCGA CGCCGACCTC CTGCTGCAGG CGGTCACCCA CCGGTCGTTC AGCTACGAGA ACGACGACGC CCCCCACAAC GAGCGGCTGG AGTTCCTCGG TGACTCCGTC CTGGGGCTGG TCGTCACCAA CCACCTGTAC CGCGCGAACC CGGACCTGCC CGAGGGTGAG CTGGCCAAGC TGCGCAGCGC GGTGGTCAGC GCCCGCGCCC TGGGGGGTGA GGCCGGCCGC CTGGACCTGG GCGACTACTT CCGGCTGGGC CGCGGGGAGG AGAACTCCGG CGGGCGTGCG AAGAACTCGA TCCTCGCCGA CGGCGTGGAG GCCGTGATCG GCGCGGTCTA CCTGTCCTCC GGGCTGGACG CGGCCACCAC GGTGGTCCAC CACCTGCTGG ACGAGCTGAT GGAGCAGTCG CAGACCATGG GGGCGGCCCT GGACTGGAAG ACCAGCCTGC AGGAGCTGGG CTCCGCCCGC GGCCTGGGAC TGCCGGAGTA CCGGATCACG GACTCCGGAC CCGACCACGC CAAGCTCTTC GAGGCCACGG CCGTCCTGGG CGGCGAGGAG GCGGGCACCG GGTCCGGGCC CACCAAGAAG GCCGCCGAGA TGATGGCCGC CGAGGCCGCC TGGCACCACC TCACGGCGCA GGGCTGA
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Protein sequence | MVELAARLEE VVGVPVDADL LLQAVTHRSF SYENDDAPHN ERLEFLGDSV LGLVVTNHLY RANPDLPEGE LAKLRSAVVS ARALGGEAGR LDLGDYFRLG RGEENSGGRA KNSILADGVE AVIGAVYLSS GLDAATTVVH HLLDELMEQS QTMGAALDWK TSLQELGSAR GLGLPEYRIT DSGPDHAKLF EATAVLGGEE AGTGSGPTKK AAEMMAAEAA WHHLTAQG
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