Gene Ksed_10860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_10860 
Symbol 
ID8372594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1109737 
End bp1110423 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content72% 
IMG OID644991366 
ProductRNAse III 
Protein accessionYP_003148893 
Protein GI256824933 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.0129939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.199787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGGAGC TCGCCGCACG GTTGGAGGAG GTCGTCGGCG TCCCGGTCGA CGCCGACCTC 
CTGCTGCAGG CGGTCACCCA CCGGTCGTTC AGCTACGAGA ACGACGACGC CCCCCACAAC
GAGCGGCTGG AGTTCCTCGG TGACTCCGTC CTGGGGCTGG TCGTCACCAA CCACCTGTAC
CGCGCGAACC CGGACCTGCC CGAGGGTGAG CTGGCCAAGC TGCGCAGCGC GGTGGTCAGC
GCCCGCGCCC TGGGGGGTGA GGCCGGCCGC CTGGACCTGG GCGACTACTT CCGGCTGGGC
CGCGGGGAGG AGAACTCCGG CGGGCGTGCG AAGAACTCGA TCCTCGCCGA CGGCGTGGAG
GCCGTGATCG GCGCGGTCTA CCTGTCCTCC GGGCTGGACG CGGCCACCAC GGTGGTCCAC
CACCTGCTGG ACGAGCTGAT GGAGCAGTCG CAGACCATGG GGGCGGCCCT GGACTGGAAG
ACCAGCCTGC AGGAGCTGGG CTCCGCCCGC GGCCTGGGAC TGCCGGAGTA CCGGATCACG
GACTCCGGAC CCGACCACGC CAAGCTCTTC GAGGCCACGG CCGTCCTGGG CGGCGAGGAG
GCGGGCACCG GGTCCGGGCC CACCAAGAAG GCCGCCGAGA TGATGGCCGC CGAGGCCGCC
TGGCACCACC TCACGGCGCA GGGCTGA
 
Protein sequence
MVELAARLEE VVGVPVDADL LLQAVTHRSF SYENDDAPHN ERLEFLGDSV LGLVVTNHLY 
RANPDLPEGE LAKLRSAVVS ARALGGEAGR LDLGDYFRLG RGEENSGGRA KNSILADGVE
AVIGAVYLSS GLDAATTVVH HLLDELMEQS QTMGAALDWK TSLQELGSAR GLGLPEYRIT
DSGPDHAKLF EATAVLGGEE AGTGSGPTKK AAEMMAAEAA WHHLTAQG