Gene Ksed_10830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_10830 
Symbol 
ID8372591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1108026 
End bp1108634 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content76% 
IMG OID644991363 
Productputative methyltransferase 
Protein accessionYP_003148890 
Protein GI256824930 
COG category[L] Replication, recombination and repair 
COG ID[COG0742] N6-adenine-specific methylase 
TIGRFAM ID[TIGR00095] RNA methyltransferase, RsmD family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.000726134 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.125771 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCA TCGCTGGGAG CCTCGGCGGG CGTCGCATCG CCGCGCCGCG GGGTGCGGAC 
ACCCGCCCCA CCAGCGACCG CGTGCGGGAG GCCCTGTTCT CGATGCTGGA GCACGAGGGC
GTCTTGCGGG ACGCCTGGGT GCTGGACCTG TTCGCCGGGT CCGGGGCCCT GGGGCTCGAG
GCTCACAGCC GGGGGGCGCG GCGCGTGGAC TGGGTCGACA GCGCGTTGCC GGCCGTCGCG
ACCCTGCGCG AGAACCTCAC CGCGCTGGGG GTGGCCGAGG ACGCCGCGGC CGGCGTACAC
CAGCGGCCCG TGCTGTCCTT CCTGCGCGCC GGACGTCGGG TCCTCGTCGG CGACGGCGGT
GACCTGCCCG ATGGGGGGCG GGCGGTGCTC GCGCTGCTCG ACCCGCCGTA CCCGCTCTCG
GAGGAGGACC TGGCCACGGT GCTCGCGGCG CTCGCCGACG ACTGGCTGGC CCCCGGTGCC
ATCGTGGTGG TGGAGCGCTC GGCGCGCAGC CCCGAGCCCA CCTGGCCACC GGGTCTGGAG
CGTTTCCGCC ACAAGGAGCA CGGGGAGACC GCCCTGTGGT TCGCCGAGCC GGTGGACCCC
CGGGCGTGA
 
Protein sequence
MRIIAGSLGG RRIAAPRGAD TRPTSDRVRE ALFSMLEHEG VLRDAWVLDL FAGSGALGLE 
AHSRGARRVD WVDSALPAVA TLRENLTALG VAEDAAAGVH QRPVLSFLRA GRRVLVGDGG
DLPDGGRAVL ALLDPPYPLS EEDLATVLAA LADDWLAPGA IVVVERSARS PEPTWPPGLE
RFRHKEHGET ALWFAEPVDP RA