Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_10770 |
Symbol | |
ID | 8372585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 1100928 |
End bp | 1102058 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644991357 |
Product | D-alanine--D-alanine ligase |
Protein accession | YP_003148884 |
Protein GI | 256824924 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 0.309547 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.44685 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGCCT CGAACCAGAC CCCGTCCTCG CGCCCCCGTG TCGCCGTCGT CTTCGGCGGC CGCTCCAGCG AGCACCCCGT GTCCTGCGCG ACCGCTGCCA GCGTCATGGC GGCCATCGAC TCCACGAAGT GGGAGGTCGT CCCCATCGGC ATCACCCGGG AGGGGCAGTG GGTGGTCTCC ACCGCGACGC CCGAGGAGCT GGCCATCAGT GCGGGCCACA TCCCCGAGGT CGCGGGGGGC GACGAGCACG TCATCGTCCC GCTGGGCTCG GCCCAGACCG ACCTGCAGGT CGTGCGCCAG GGCCTCCCGC CCGAGCTCCT CGGTGAGGTG GACGTCGTCT TCCCGCTGCT GCACGGCCCG TTCGGGGAGG ACGGCACCCT GCAGGGCCTG CTGGAGATGG CCGACCTGCG CTATGTGGGG TGTGGTGTGG CCTCCTCGGC GATGATGATG GACAAGCACC ACATGAAGGT CATCTTCGAG GCCGCTGGCC TCGAGGTGGG GCCCTACCGG GTGATCACCG ACCGCATGTG GCGTGCCGAC CGCCAGCAGG CCCTGGCCTC CGTCGAGGGG CTCGAGCTGC CGGTGTTCGT CAAGCCCGCG CGGGCCGGGT CCTCGATGGG GATCACCCGC GTGGACGACC TCGCGGACCT GGAGCAGGCG GTCGAGGCCG CCCGCGAGCA CGACCTCAAG GTGGTGGTCG AGCAGGGCAT CGACGGGCGC GAGCTCGAGT GCGCCGTGCT GGACGGACAC GGGGCCGAGC CGCCGCGGGC CAGCACGGTC GGCGAGATCG TCGTCTCCGG CGGGCACGGC TTCTACGACT TCGAGGCCAA GTACCTCGAC GAGTCCTCCA CCACGCTCTC GGCCCCCGCG GAGGCGCCGG AGCAGGTCAT CGAGGAGATC CGTCGCCTGG CCGTGCACGC CTTCGACGCG GCGGACTGCG AGGGGCTGGC GCGGGTCGAC TTCTTCGTCA CCCCCGACGA GCGCATCCTC ATCAACGAGA TCAACACGAT GCCGGGCTTC ACCCCGTACT CGATGTACCC CGCCCTGTGG GCGGCCTCAG GCATTTCTTA CCCGGAACTG ATCGACGAGC TGCTCACGCT GGCGCTGGAG CGCCCCCTCG GCCTGCGCTG A
|
Protein sequence | MSASNQTPSS RPRVAVVFGG RSSEHPVSCA TAASVMAAID STKWEVVPIG ITREGQWVVS TATPEELAIS AGHIPEVAGG DEHVIVPLGS AQTDLQVVRQ GLPPELLGEV DVVFPLLHGP FGEDGTLQGL LEMADLRYVG CGVASSAMMM DKHHMKVIFE AAGLEVGPYR VITDRMWRAD RQQALASVEG LELPVFVKPA RAGSSMGITR VDDLADLEQA VEAAREHDLK VVVEQGIDGR ELECAVLDGH GAEPPRASTV GEIVVSGGHG FYDFEAKYLD ESSTTLSAPA EAPEQVIEEI RRLAVHAFDA ADCEGLARVD FFVTPDERIL INEINTMPGF TPYSMYPALW AASGISYPEL IDELLTLALE RPLGLR
|
| |