Gene Ksed_10680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_10680 
Symbol 
ID8372576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1094100 
End bp1094735 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content73% 
IMG OID644991348 
Productnicotinamidase-like amidase 
Protein accessionYP_003148877 
Protein GI256824917 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.107249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.953023 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCG AGACGGCACC GAACACGACC GCCCTGCTGG TGGTGGACGT GCAGAACGAC 
TTCTGCCCCG GCGGCAGCCT GGCCACCACC GGAGGTGATG CGGTGGCCCA CGCGGTCGCG
CAGCACGTGC GCGACGCCGG CGACCGCTAC GCCGCGGTGG TGGCCACCCA GGACTGGCAC
GAGGACCCGG GAGACCACTG GTCGGACAAC CCGGACTTCG TGGACTCATG GCCGGTGCAC
TGCGAGGTGG GCACCGAGGG CGCCGCGTTC CACCCGGCGG TGGCCGAGGT CGCCGAGACC
TTCGACGCCG TCTTCCGCAA GGGCCGCTTC GAGGCCGCCT ACAGCGGCTT CGAGGGCCAC
CTGGCCAGCG ACGGCGACAC CAGCGAGGGC GACACCGACC CCACGATGCT GGCGACCTGG
CTGCGTGACC GGGGCATCGA CGCGGTGGAG GTGTGCGGGA TCGCCACCGA CCACTGCGTG
CGCGCCACCG TGATCGACGC CCTCTCGGCC GGCTTCTCCG CCCACGTCCT GCTGGGCCTC
ACCAGCGGCG TCGACGAGGC GGCCTCCACC TCCGCCGTGC AGGAGATGGA GGCCGCCGGG
GCCACGACCG AGGGTCAGCC CCGGCTGACC GCCTGA
 
Protein sequence
MTRETAPNTT ALLVVDVQND FCPGGSLATT GGDAVAHAVA QHVRDAGDRY AAVVATQDWH 
EDPGDHWSDN PDFVDSWPVH CEVGTEGAAF HPAVAEVAET FDAVFRKGRF EAAYSGFEGH
LASDGDTSEG DTDPTMLATW LRDRGIDAVE VCGIATDHCV RATVIDALSA GFSAHVLLGL
TSGVDEAAST SAVQEMEAAG ATTEGQPRLT A