Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_10440 |
Symbol | |
ID | 8372553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 1066418 |
End bp | 1068715 |
Gene Length | 2298 bp |
Protein Length | 765 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644991325 |
Product | hypothetical protein |
Protein accession | YP_003148854 |
Protein GI | 256824894 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.124596 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGGGGT CCGTGTCGAC CCTGGTGCCC CTCTTTCTCC GGACGCGTTC GTTCCGACTG GCAATGCTCC CGCTCCTCGT GGCAGCGGCA TTGGGCTGGA CGTCCTACCT CAGCCTCGAG TCTCGGCACT TGAGTCCCGA GCAACAGGTC GTCTCGGTGC TGGGTGGGAG TGACGGCGGG ACCACCATGG CGGCGCCGGT GCCACCTGGC CGATCACCCG CGGACACGGG CGGATTGTTC GACGGCGTTG AGGTCGATGC CGTTCGCTTG CTCGCGTCGC TGGAGGTGCA GACAACTGCA GGCTCGAAGG GCTTGTCGTA CTACGAACAG CCCCTACCGA ACCCCTCTGT GGCGGGCGAC CTCGAACTCG CTTCGGGGCG GTGGCCCACT CGTCCCGGCG AGGTGGCGGT GAGTGAGGCC ACCGGGCTGC GTGTCGGAAG CGAGTTGCGG CCCGTCCATG GTGAGTTGAA GCTCACTGTG GTGGGTGTGG TGAGCTCGGT GTGGGCCTCA TCGCAGGAGG TGGTGCATGG TGCGCCGGGG ACCTGGCGGA CTTGGCAGAT CTCCCCCGCA GCCGTTGAGC GAGCGGGCAT CACGAGCTAC CGCGAGGTCT ACTGGAGCAG CCCAGATCCG GCTGCGGCGG CATCACGTCT GGACCGGGAG GTGGAGACAG GTGGGCTGGA CCCGTCCTAC ACCGCCGAGG AGATTCGCGC GAAGGCTTCG TCTTTCAGCG CGAAGGCGTG GATGGAGCGG AGGCTCCCGG CCGTGCTGGC GGTGTGGCTT GGGGCGCTCA TGACCGGAGC CCTGATGCTG CGTGCCCTGC GGCGCACCAC CGTCCCCCTG CGACGAGTGG GTCTGCCGAC GCGTGACCTG CATCGTGCCG CAGTCCTCGC AGCGCTCTGT GCGGCAACCG CGGTACTGGC CGGGGCGTGG CTGGGGTCAC TCGCAGCCAC GGCGGCCATG AGGCGATTCC TTCTCGCGGG CGATAGGCCG CTGCCGCCCT TCCAGTGGTG GGGGTCTCCC ATCGGGGTCG GTGTTCTGAC GGGCCTCGCA GTGGTCGGGC TGCTGACGGC GCTCCCCACA GGGGCCCGTC CGCGTCCAGC GTCACGGCGC GCTCTTCCTC CGCGCGTGAT GGCGGTCGCA GGTGCCGTGC TATGTGTGCT GGCCATCGTG GGAGCATTTC AGGGCAGGGG GTACACCGCC ATCCTGCTGA CGATGCTCGC GAGTTGCTTG GGCACTGCTC TCATCGCTGG AGCAGCCATG AGTCTGTTGC CGAGCCACGG TGCGGTGGGG CCCGGCCTGC TGGCTCGCCG CCTGGTGAAT CGCCAAGCCG GCGGTCTGAC CGGCCTGGTG GTTGTGGTGG CCCTTCTCAG CAGCATTGTC GGATCCACCT TCGCGGTGGC AGCCGGTCTG ACCGCGCACC TCAACGCCAG CTCCTCCACC GGTATGCCGC CGGGGCTTGT CGCGTTCAAA GGGACGGCCC CGGGACAACC GCCGGACGGT GAACTCCACG CCCAGTTTCA GCAGGACATG GGGTTGGGGG ACCCAGTGGT GGTCTGGTAC GCCGACCAGC CGACGGAAGA TGGCGACTAC GAGTCGTGGT GGGCTGTTCG CGACGTGGCA GATGCCGAGG CCATCTTCGG CGAGCTCACC GGCGAGCAGG AACATGCGTT GGCGTCACCC CGCGGGCTGC CGTTGACCAC TGAGCCAGGC GGAACCGAGA CAGCACTCGT TGTGCATGAG GACCTGAAGT ACCTCCAGTC CCTTCGCCGT GGGGAGCCGG GAAGACCTGC ACGGGTGGAC ACCCTGTGGG TGCACTCCGG TCTGACCCCC GCGCAGGACC GGCAGGCGGC TCGTTGGGCC GAGGAGAACT CCGTCAACCC CGTCATGGTG TGGCCCACGA GCGTCACCGA CCCCATCCCC ATCTCCATGG GTGTTCAACT CTCGGCGACA GCCTTCACTC TTCTGGCTCT GTTGGTGTGC GCAGTCGGCA TGCGCGGATT GGTGCGCAGC CTGGTGCCGC TCCTGGCGGG TCTCAAGGCC AGCGGCCTGG GCGCCCGGTG GCTTCGATCG GCCGTGCTGC AGGTGAGTTT GTTGGTGGGT TCCATGGCGA CGCTGGGTGG TCTGGCGGGC ATCCTCCTGT CGTTGTTCAC GATCAACCCG TTGGTGAACA ACACGATCGT CGTGGGAAGC CTGCCCTGGG TCGCCCTCGC GCTGGTGGCG GTCGGTGGCC TGCTCGGGTC ACTGCTCGGT GGCGCTGCGG CCAGCTGGCG GGTGCGGGCG GGGGAGCGGC GCGCCTGA
|
Protein sequence | MKGSVSTLVP LFLRTRSFRL AMLPLLVAAA LGWTSYLSLE SRHLSPEQQV VSVLGGSDGG TTMAAPVPPG RSPADTGGLF DGVEVDAVRL LASLEVQTTA GSKGLSYYEQ PLPNPSVAGD LELASGRWPT RPGEVAVSEA TGLRVGSELR PVHGELKLTV VGVVSSVWAS SQEVVHGAPG TWRTWQISPA AVERAGITSY REVYWSSPDP AAAASRLDRE VETGGLDPSY TAEEIRAKAS SFSAKAWMER RLPAVLAVWL GALMTGALML RALRRTTVPL RRVGLPTRDL HRAAVLAALC AATAVLAGAW LGSLAATAAM RRFLLAGDRP LPPFQWWGSP IGVGVLTGLA VVGLLTALPT GARPRPASRR ALPPRVMAVA GAVLCVLAIV GAFQGRGYTA ILLTMLASCL GTALIAGAAM SLLPSHGAVG PGLLARRLVN RQAGGLTGLV VVVALLSSIV GSTFAVAAGL TAHLNASSST GMPPGLVAFK GTAPGQPPDG ELHAQFQQDM GLGDPVVVWY ADQPTEDGDY ESWWAVRDVA DAEAIFGELT GEQEHALASP RGLPLTTEPG GTETALVVHE DLKYLQSLRR GEPGRPARVD TLWVHSGLTP AQDRQAARWA EENSVNPVMV WPTSVTDPIP ISMGVQLSAT AFTLLALLVC AVGMRGLVRS LVPLLAGLKA SGLGARWLRS AVLQVSLLVG SMATLGGLAG ILLSLFTINP LVNNTIVVGS LPWVALALVA VGGLLGSLLG GAAASWRVRA GERRA
|
| |