Gene Ksed_10180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_10180 
Symbol 
ID8372527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1045833 
End bp1047008 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content71% 
IMG OID644991299 
Productpredicted acyl-CoA transferase/carnitine dehydratase 
Protein accessionYP_003148828 
Protein GI256824868 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGGAG CGTTACAGAA CATCACCGTC ATCGACCTGA CCCGGGCCCT CGCCGGCCCC 
CACGCGGCCC AGATGCTGGG CGACCAGGGC GCGCGGGTCA TCAAGGTGGA GACCCCCGGC
ACCGGGGACG ACACCCGCTC CTGGGGGCCG CCCTTCGTCG GGGACGACGA GCACATCAGC
ACCTACTACC TCTCCTGCAA CCGCAACAAG GAGTCCATCG CGCTGAACCT CAAGGACGAT
GCCGACAAGG CCGTCCTGGA GGGAATGGTC CGCAAGGCCG ACGTGCTGAT GGAGAACTTC
CGCACCGGCG TGATGGACCG CCTCGGGTTC TCGATGGAGC GGCTGGCCGA GCTGAACCCG
CGCCTGGTGG TGCTGAGCAT CAGCGGCTTC GGCCACGACG GCCCCGAGGG CGGGCGCCCC
GGGTACGACC AGATCGCCCA AGGTGAGGCC GGGCTGATGA GCCTCACCGG CTCCGGGCCG
GACGACCCGC AGCGGGTGGG CACCCCCATC GGCGACCTGT TGGCCGGCAT CCACGGCGCC
TACGGCGTGA TGACCGCGCT GTACGAGCGG GAGACGACCG GCCGCGGGCA GGTCGTGCGG
ACCTCGTTGC TCGCCAGCAT CGTGGGCGTG CACGCCTTCC AGGGCACCCG GTGGACCGTG
GCGCAGGAGA TTCCCGCCGC CCAGGGCAAC CACCACCCGA GCATCACGCC CTACGGCCTG
TTCCACTGCG CGGACGGGTC GGTGCAGATC TCGTGCGGCA ACGAGACTCT CTGGCAGAAG
CTGTGTGCAG AGTTCGGGCT GGACCCGGCC GCTGAGGGCA TGGCGACCAA CGCCGAACGC
AACGCGAACC GGCAAGCCGT CATCGCCGCC GTGGAGGGTG CGTTCGCGGA CGTGACCGCC
GAGGACCTGC TGGCACGGCT CGGCGCCGCG GGCATCCCCA GCGGCAAGGT GCGGACCCTG
GACGAGGTCT ACGCGTGGGA GCAGACCCGT TCGCAGGGAC TGCTGGCCCA GGTGGAGCAC
CCGGTGCTGG GTAACATCCA TCTGCCCGGG CCGCCGCTGC GCTTCTTCGA CGTGGCCGAC
GGTGCCCAGA CCGAGACCAC CCGTACCGAG CACACCGCTC CCCCGGCCCT GGATGCCGAT
GGGGATGTCG TGCGCGCCTG GGCACTCGGC GGGTGA
 
Protein sequence
MPGALQNITV IDLTRALAGP HAAQMLGDQG ARVIKVETPG TGDDTRSWGP PFVGDDEHIS 
TYYLSCNRNK ESIALNLKDD ADKAVLEGMV RKADVLMENF RTGVMDRLGF SMERLAELNP
RLVVLSISGF GHDGPEGGRP GYDQIAQGEA GLMSLTGSGP DDPQRVGTPI GDLLAGIHGA
YGVMTALYER ETTGRGQVVR TSLLASIVGV HAFQGTRWTV AQEIPAAQGN HHPSITPYGL
FHCADGSVQI SCGNETLWQK LCAEFGLDPA AEGMATNAER NANRQAVIAA VEGAFADVTA
EDLLARLGAA GIPSGKVRTL DEVYAWEQTR SQGLLAQVEH PVLGNIHLPG PPLRFFDVAD
GAQTETTRTE HTAPPALDAD GDVVRAWALG G