Gene Ksed_09960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_09960 
Symbol 
ID8372505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1027215 
End bp1028033 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content72% 
IMG OID644991277 
Productnon-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 
Protein accessionYP_003148807 
Protein GI256824847 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0127] Xanthosine triphosphate pyrophosphatase 
TIGRFAM ID[TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value0.685162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.205166 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCTC GCCGCATCGT GCTCGCCACC CGCAACAAAG GCAAGGTTCC CGAGCTGCAG 
CGGATCCTGT CCGAGGTGTT GCCGGGTGAG ACCGAGGTCG TGACCCTGGC GGACGTGGCC
CCGGGCGCGC CCGACGTGGT GGAGAACGGC GTCACCTTCG AGGCGAACTC GCTACTGAAG
GCCCGAGCTG CGTGCGAGCT GACGGGTCTG CCCGCCATCG CCGACGACTC GGGGTTGTGC
GTGGACGTCC TGGGTGGCGC GCCGGGCATC TTCTCCGCGC GCTGGTCCGG CGGCCTGGTG
GACTCCACCG GTGCCGGGCC CGGGGCGGAC CGCGACGCGG ACAACATCGC GCTGCTGCTG
GCCCAGCTGG CGGACGTGCC GGACGAGGAG CGCGGGGCAC ACTTCGCCTG CGTCATGTCC
TACGTGGACC CCGATGGCCT CGAGCTGACC GCCCGCGGCG AGATGCAGGG CGTCATCCTG
CGCGAGCGGC AGGGCGAGTA CGGGTTCGGT TACGACCCAA TCTTCGGGGT GGATGCCACG
GAGTTCGACG ATGCCGAGCA GCCGCAGGTC CAGGCGGTCG GTCCGTCCTC GCGCAACGGG
TCGGACGTGC CGGACGTCAT CTCCGAGGTG GCGGCCGAGG GGCACGCCTC CGAGGTCGCC
GCGGACGCAG CCGCCAAGGT GGGGGACGAC ACCCCCTTCA CCGCCGGTGA CGATGGAGCG
GTGAGCGCGG CGGAGCTGCC CCCGGAGGTG AAGAACGCCA TCAGCCACCG CGGCCGCGCG
GTGCGCAAGC TGGCGGCGCA GCTGGCCCCG GTGGTCTGA
 
Protein sequence
MAARRIVLAT RNKGKVPELQ RILSEVLPGE TEVVTLADVA PGAPDVVENG VTFEANSLLK 
ARAACELTGL PAIADDSGLC VDVLGGAPGI FSARWSGGLV DSTGAGPGAD RDADNIALLL
AQLADVPDEE RGAHFACVMS YVDPDGLELT ARGEMQGVIL RERQGEYGFG YDPIFGVDAT
EFDDAEQPQV QAVGPSSRNG SDVPDVISEV AAEGHASEVA ADAAAKVGDD TPFTAGDDGA
VSAAELPPEV KNAISHRGRA VRKLAAQLAP VV