Gene Ksed_09950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_09950 
Symbol 
ID8372504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1026349 
End bp1027215 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content74% 
IMG OID644991276 
ProductRNAse PH 
Protein accessionYP_003148806 
Protein GI256824846 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0689] RNase PH 
TIGRFAM ID[TIGR01966] ribonuclease PH 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.296895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.201234 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACG CCCCCGCATC GGCCACCCAG ACCACTGCGT CCACCTCTGA GACCACCCCT 
GGCGCGCGCC ACGACGGCCG CGCGCCCGAC CAGCTGCGAG ACGTCCGCAT CACCCGCGGC
TGGCTCGACC ACGCCGCCGG CTCGGTCCTC ATCGAGTTCG GCCGCACCCG GGTGCTGTGC
GCGGCCTCCT TCCAGCCCGG CGTCCCGCGC TGGCTCAAGG GCCAGGGCAC GGGGTGGGTC
ACCGGCGAGT ACGCCATGCT GCCCGCCGCC ACCCACACCC GTAGCGACCG CGAGTCGGTC
AAGGGCAAGG TCAAGGGCCG CACGCAGGAG ATCTCCCGCC TGCTCGGCCG CGCGCTGCGG
GCCGCGGTGG ACACCTCGGC GCTGGGGGAG AACACCATCG TCATCGACTG CGACGTCCTG
CAGGCCGATG GGGGAACCCG CACCGCCGCC ATCACCGGTG CCTGGGTCGC GCTGGCCGAT
GCGGTGGCCG CCGGCAAGGC CTCGGGAGAC ATCCCGGCCA ACGCCCAGGT GTTGCGCGAC
TCCATCCAGG CCATCAGCGT CGGCATCGTG GACGGGCAGC CGGTGCTCGA CCTGGACTAC
CCGGAGGACT CCGGTGCCGG CGCGGACATG AACGTCGTCA TGACCGGCGC AGGCGAGCTG
GTGGAGGTGC AGGGCACCGC CGAGGGGCAG ACCTTCGACC GCGCGATGCT GAACGCCCTG
CTCGACCTCG CCCAGGACGG CTGCGCCACC CTCGCCGCCG CCCAGCAGGC CGCCCTGGCC
CTCGATGCGG GGGAGCGCCT CGAGGTGTCG CCCGGCGAGC AGCCGGCGCA GCCCGGGCAG
GCCCAGCAGG ACGGGCAGGA CGCCTGA
 
Protein sequence
MTDAPASATQ TTASTSETTP GARHDGRAPD QLRDVRITRG WLDHAAGSVL IEFGRTRVLC 
AASFQPGVPR WLKGQGTGWV TGEYAMLPAA THTRSDRESV KGKVKGRTQE ISRLLGRALR
AAVDTSALGE NTIVIDCDVL QADGGTRTAA ITGAWVALAD AVAAGKASGD IPANAQVLRD
SIQAISVGIV DGQPVLDLDY PEDSGAGADM NVVMTGAGEL VEVQGTAEGQ TFDRAMLNAL
LDLAQDGCAT LAAAQQAALA LDAGERLEVS PGEQPAQPGQ AQQDGQDA