Gene Ksed_09940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_09940 
Symbol 
ID8372503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1025013 
End bp1026338 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content75% 
IMG OID644991275 
Productpredicted membrane protein 
Protein accessionYP_003148805 
Protein GI256824845 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.903662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.219021 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTCCC CCGCACCCGC CCCCGCCCCC TCGCGCCTGC CGGGCGTCCT CGCCTGCCTG 
GTTGCCGGCC TGGCCTCGAT GGGGGTGGCG CGCCTCATCG GCACCGCCGT GCCGGCGGTG
AGTCCGTTGC TGGTGGCGAT CCTGCTGGGC ATCGTGGTGG GGAACCTCGT CGCGCTCCCC
GCCAGCTGGG CCCCGGGGTT GACCAAGGGC AGCAAGACGA TGCTGCGCGC CGGCATCGTG
CTGCTGGGCC TGCAGGTGTC GCTGGCGACC ATCGTCGGCC TGGGCTGGCG GGTGGTGCTG
GCCGTGGTGG TCGTGGTGGT GGCGGGTTTC GCGACGGCCG TGGTGGCCGG GCGGTTGCTG
GGTGTGCGGC CGGTGCTGGC GCTCCTGGTC GGGTCGGGAT TCTCCATCTG CGGTGCGGCG
GCGGTGGCGG CGGCCGACGG GGTGTTGGAG TCCGACGAGC AGGACGTGGC CGTCGCGCTG
GCGCTGGTCG TGCTCTTCGG GACGCTGATG ATCCCGGTGG TGCCGTTGGC CGCCTCGGCG
ATGGGGGTGG ACCCCCACAC GACCGGGCTG TGGGCGGGGC TGTCGGTGCA CGAGGTGGCG
CAGGTGGTGG CTGTCGGTGG CATCGTGGGC TCCGGTGCTC TGGCCGTGGC GGTGGTGGCC
AAGCTGGCGC GGGTGGTGCT GCTGGCCCCG GTGATGGTGG GGCTGGCCGT GTGGCGTCGT
CGCCAGCTGC GGGCCGAGCA GGTGCGGGCC GGGCAGGCCG ACGGGGGAGC GGCCCACCCG
ACGGCCGGGC AGGACGCCGT CACCCTGCCG CCGCTGGTGC CCTTCTTCGT GGTGGCCTTT
CTCGCGATGG TTCTCGTGCG CACCTGGGTG CCGTTGCCCT CGGTCCTGCT GGAGGTGGCG
ACGGTGGCCC AGACCGTGCT GCTGGCCGCG GCCATGTGGG CCCTGGGCAC GGGCGTGCAG
TGGTCGAAGC TGCGTGCGGT GGGCGGTGCG CCGTTCGCCC TCGCCGGGAT CACGACCGCC
GTAGTGGCCG CCGTCGGCCG GTGGGGCGGT CCTGGCCTGA GAGAGCCAGC ACCACCGGGG
TGGGGGCTTG GACCCACCTT CCGCCCGGTC CGCGCGGAGG GCGCCCGGCC CCACCTCGCG
CCCGGTCCGT GGGGAGGGCG CTCGGCCCCA CCCGCTGGGA CGTCGCACTT TGCAAGTGAG
TCGTCGCACT TTGCACGGAT CGGCGCTGGT TCCTGCAATG CGCGACGCAC CACGGGAAAT
GTGCGACGCC TCGATGCGGT GACGGGGCCG GACCGCTCCG GGAGCCACCC CCACCGCGCC
CCGTAG
 
Protein sequence
MTSPAPAPAP SRLPGVLACL VAGLASMGVA RLIGTAVPAV SPLLVAILLG IVVGNLVALP 
ASWAPGLTKG SKTMLRAGIV LLGLQVSLAT IVGLGWRVVL AVVVVVVAGF ATAVVAGRLL
GVRPVLALLV GSGFSICGAA AVAAADGVLE SDEQDVAVAL ALVVLFGTLM IPVVPLAASA
MGVDPHTTGL WAGLSVHEVA QVVAVGGIVG SGALAVAVVA KLARVVLLAP VMVGLAVWRR
RQLRAEQVRA GQADGGAAHP TAGQDAVTLP PLVPFFVVAF LAMVLVRTWV PLPSVLLEVA
TVAQTVLLAA AMWALGTGVQ WSKLRAVGGA PFALAGITTA VVAAVGRWGG PGLREPAPPG
WGLGPTFRPV RAEGARPHLA PGPWGGRSAP PAGTSHFASE SSHFARIGAG SCNARRTTGN
VRRLDAVTGP DRSGSHPHRA P