Gene Ksed_09920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_09920 
Symbol 
ID8372501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1023333 
End bp1024190 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content72% 
IMG OID644991273 
Productglutamate racemase 
Protein accessionYP_003148803 
Protein GI256824843 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value0.634287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.13498 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACGG CTCCCATCGG CATCTTCGAC TCCGGTCTCG GGGGGCTCAC CGTGGCCCGG 
GCCGTCATCG ACCACCTGCC GCACGAGTCG ACGGTGTACC TGGGCGACAC CCACCACGCT
CCCTACGGCC CGCGCCCCAT CGCGGAGGTC CGACGGCTGG CCCTGGACTC CCTCGACGCG
TTGATGGATC GCGGGGTCAA GGCCCTGGTC ATCGCCTGCA ACTCCGCCTC GGCAGCCGTC
CTGCACGACG CCCGCGAGCG CTACTCGGTC CCCGTCATCG AGGTGATCCG TCCCGCGGCC
CGCCGCGCCG CCGGCATCAC CCGCACCGGG GCCGTCGGCG TCATCAGCAC GCAGGCCACC
CACACCTCCG GGGCGTACCG GGACGCGTTC GCCGCCGTCC CCTCGGTGCA GCTCCGTTCG
CAGCCGTGCC CCCGCTTCGT TCACTTCGTG GAGTCCGGCA CCATCTCCGG CCCGGAGGTC
TTCGCCGCCG CCACCGAGTA CCTGCAGCCG CTGAAGGAGG CGGGCGTGGA CACCCTCATC
CTGGGGTGCA CGCACTACCC CCTGCTGCGC GGCGTCATCG CCTACGAGAT GGGTCCGGAG
GTCTCGCTCG TCTCCTCCGC GGAGGAGACC GCCGCCGAAC TGCTGCGCAC CCTGGCCGAC
CGGGGCGAGC TCGCCCCGGA CGCCACGGTG CCCACCCACG AGTTCCTCAC CACGGGCGAC
CCCTCCCAGT TCAGCGAGCT CGCCCGCCGC TTCCTCGGCC CCGAGGTGAG CGCGTTGAAC
ACCCACCGGC TGCCGGTGGA GACTGACGTC CCTCCCACCG GGTCCCTCCC AGTGCTCGAG
GCGGGGGACG TCCGATGA
 
Protein sequence
MSTAPIGIFD SGLGGLTVAR AVIDHLPHES TVYLGDTHHA PYGPRPIAEV RRLALDSLDA 
LMDRGVKALV IACNSASAAV LHDARERYSV PVIEVIRPAA RRAAGITRTG AVGVISTQAT
HTSGAYRDAF AAVPSVQLRS QPCPRFVHFV ESGTISGPEV FAAATEYLQP LKEAGVDTLI
LGCTHYPLLR GVIAYEMGPE VSLVSSAEET AAELLRTLAD RGELAPDATV PTHEFLTTGD
PSQFSELARR FLGPEVSALN THRLPVETDV PPTGSLPVLE AGDVR