Gene Ksed_09910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_09910 
Symbol 
ID8372500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1022415 
End bp1023194 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content70% 
IMG OID644991272 
Product2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase 
Protein accessionYP_003148802 
Protein GI256824842 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0811922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCT GCCGGTTCAC CGACGACTCC GACGAGCCCC GCTACGGCCT GATGGACGGC 
GAGGGCACCA AGATCGCCGA GGTCTCCGGC GACCCGCTCT ACACCGCCAT CGAGCTCACG
GGCAAGACTT TCACCACCGA GGACGTCCGC CTGCTGGCCC CCGTGATCCC GCGCTCCAAA
GTGGTGGGCG TGCGCCGCAA CTATGCGGAC CACGCCGCCG AGATGGGCAA CCAGACCGAT
GCGGAGCCGG GCCTGTTCCT CATGCCGAAC ACCGCCGTCT GCGGCCCGGG CGACCCGGTC
TTCATGCCGT CGATCTCCTC CGAGATCAGC TACGAGGGCG AGCTGGCGGT CATCATCGGC
CGCATGTGCA AGGACGTCGC CCCGGAGGAC GTCCCCGGTG TCGTGCTCGG CTACACCTGT
GCCAACGACG TGACCGCCCG CGACCTGCAG AAGGCCGACG GCCAGTGGGC CCGCGCCAAG
GGCATGGACA CCTTCTGCCC CCTGGGCCCC TGGATCGAGA CCGAGCTCGA CACCTCCGAC
CTCGTGGTCC GCACCCGTCT CGACGGTGAG CTGGTCCAGG ACGGCACCAC CGCGGACATG
GTCTTCGACG TGGCCACGAT CGTCTCCCAC GTCTCGCGCG CGTTCACCCT GCTGCCGGGC
GACGTCATCC TCACCGGCAC CCCGGCTGGC GTGGGGCCGG TGCAGCCGGG GCAGACCGTC
GAGGTCTCCA TCCAGGGCAT CGGTCGCCTG GCCAACCCCT TCGTCTCCGC GGAGGACTGA
 
Protein sequence
MRICRFTDDS DEPRYGLMDG EGTKIAEVSG DPLYTAIELT GKTFTTEDVR LLAPVIPRSK 
VVGVRRNYAD HAAEMGNQTD AEPGLFLMPN TAVCGPGDPV FMPSISSEIS YEGELAVIIG
RMCKDVAPED VPGVVLGYTC ANDVTARDLQ KADGQWARAK GMDTFCPLGP WIETELDTSD
LVVRTRLDGE LVQDGTTADM VFDVATIVSH VSRAFTLLPG DVILTGTPAG VGPVQPGQTV
EVSIQGIGRL ANPFVSAED