| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_09760 |
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| Symbol | mnmA |
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| ID | 8372485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | + |
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| Start bp | 1006351 |
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| End bp | 1007601 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644991257 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_003148787 |
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| Protein GI | 256824827 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.00017966 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0196057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTACC CCACGACTGC CCTGCCCACC GACGGTCGCC GCCTGCGGGT GGTGGCCGCC
ATGAGCGGCG GAGTGGACTC CGCCGTGGCC GCGGCGCGCA TGATCGATGC GGGGCACGAG
GTCACCGGCG TCCACCTGGC GCTGAGCCAG TCGGCCGAGA CCCTGCGGGA GAGCGCTCGG
GGCTGCTGCA CGCTGGAGGA TGCGGGGGAC GCTCGCCGGG TCGCCGACGC CCTGGGCATC
CCGTTCTACG TGTGGGACAT GGCAGAGCGT TTCCGGCGCG ACGTCATCGA GGACTTCGTG
GCCGAGTACG AGGCCGGCCG CACCCCGAAC CCGTGCCTGC GGTGCAACGA GTCCATCAAG
TTCGCTGCCC TGTTGGACAA GGCCGTGGCC CTGGGTTTCG ACGCGGTGGC CACGGGGCAC
TACGCGCAGG TCGTGGAGGT GCCGGACCCG GCGGCCGAGG GAGGCGTGCG CCGCGAGCTG
CACCGGGCGG TGGACGCCGC GAAGGACCAG AGCTACGTGC TCGGCGTGCT GGACGCCGAT
CAGCTCGCCC GGGCCCACTT CCCGCTCGGT GACACCACCA AGCCGCAGAT CCGCGAGGAG
GCAGCCCGCC GCGGCTTCTC GGTGGCACGC AAGCCGGACT CCCACGACAT CTGCTTCATC
GCCGACGGCG ACACCCGGGC CTACCTGGCC GAGCGGCTGG GGGAGCAGCC CGGGAACATC
GTCGACCCCG CGGGCCGGGT GCTCGGGACC CACGGGGGAG CCCACGGCTA CACGGTGGGG
CAGCGCAAGG GGTTGGGCCT GCGGGTGCCG GCGAGTGACG GGGCGCCGCG CTACGTGCTG
CGCACCGACC CGGCCACCAA CCAGGTGGTC GTGGGCCCGA AGGAGATGCT GGGAGTCGAC
GTGATCCGCG CCGACCACGT CCGCTGGTGC GGGCCGGCGC CGGAGGGCGA GACCCGACTG
GGTGCCCAGA TCCGAGCCCA CGGCGCGGAG TACCCGGCAC GCGTGGTGGT CAGTGGCGCG
GACGCCTCTG GGTCGCTCTT GAGCGGGCCC GGGCGCAGCG AGCCCGGGGA CGGTGAGATC
GCCGCCACCG CGGGGCACCA GGGGGTGACC GTGTTCCTTG ATGAGCTGGT CCGCGGGGTG
GCCCCGGGCC AGTCCGTGGT GCTCTACGAC GGGACGCGGG TGGTCGGGTC GGCCACGATC
ACCGCGACCG ACCGGAGCCG GCTGCCTGAG CTCGCGCACC CGGGCGTCTG A
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| Protein sequence | MTYPTTALPT DGRRLRVVAA MSGGVDSAVA AARMIDAGHE VTGVHLALSQ SAETLRESAR
GCCTLEDAGD ARRVADALGI PFYVWDMAER FRRDVIEDFV AEYEAGRTPN PCLRCNESIK
FAALLDKAVA LGFDAVATGH YAQVVEVPDP AAEGGVRREL HRAVDAAKDQ SYVLGVLDAD
QLARAHFPLG DTTKPQIREE AARRGFSVAR KPDSHDICFI ADGDTRAYLA ERLGEQPGNI
VDPAGRVLGT HGGAHGYTVG QRKGLGLRVP ASDGAPRYVL RTDPATNQVV VGPKEMLGVD
VIRADHVRWC GPAPEGETRL GAQIRAHGAE YPARVVVSGA DASGSLLSGP GRSEPGDGEI
AATAGHQGVT VFLDELVRGV APGQSVVLYD GTRVVGSATI TATDRSRLPE LAHPGV
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