| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_09620 |
|---|
| Symbol | |
|---|
| ID | 8372471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 990983 |
|---|
| End bp | 991564 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644991243 |
|---|
| Product | intracellular protease, PfpI family |
|---|
| Protein accession | YP_003148773 |
|---|
| Protein GI | 256824813 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0693] Putative intracellular protease/amidase |
|---|
| TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 0.0277883 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.149704 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA CCACGCAGGA CACCCAGAAC ACCGGCAAGG CCGTCATCTT CCTGACCTCC
GCCGAGGGCA TTGAGGCCGT CGAGCTCACC GATCCGTGGG AGGCGCTGAC CGACGCTGGC
CACACCCCGC GGCTCGTCAC CCCTGAGGGC GGAGAGGTCC AGCTCTTCAA CCACTTGGAC
AAGGCCGAGA CCCGCACAGC TGACGCCACC GTGGCCGACA TCGACCCGGC CGAGGTGGAC
CTGTTGGTGC TCCCCGGTGG CGTGGCCAAC CCGGATCTGC TGCGCCAGAG CGACGAGGCC
GTGCAGTTCG TCAAGGCCGT TCATGATGCG GGCAAGCCCG TCGCCGCGAT CTGCCACGCT
CCGTGGGTGC TGGCCGAGGC GGGTGTCGTC TCTGGCCGCC GCCTCACCGG TTTCGCCAGC
CTCGAGACCG ACCTGCGCAA TGCCGGCGCG GAGTGGGTGG GCGACCAGGA GGTCGTGGTG
GACGGCAACC TCATCACCAG CCGCAACCCT GATGATCTGC CGGCCTTCAA CGGCGCGGTC
ATCGAGGCGC TCGACCACGG GACGGCCGCA GCGCAGGGCT GA
|
|---|
| Protein sequence | MTDTTQDTQN TGKAVIFLTS AEGIEAVELT DPWEALTDAG HTPRLVTPEG GEVQLFNHLD
KAETRTADAT VADIDPAEVD LLVLPGGVAN PDLLRQSDEA VQFVKAVHDA GKPVAAICHA
PWVLAEAGVV SGRRLTGFAS LETDLRNAGA EWVGDQEVVV DGNLITSRNP DDLPAFNGAV
IEALDHGTAA AQG
|
|---|
| |