Gene Ksed_09490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_09490 
Symbol 
ID8372458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp972155 
End bp973249 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content71% 
IMG OID644991230 
ProductABC-type transport system, involved in lipoprotein release, permease component 
Protein accessionYP_003148760 
Protein GI256824800 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.457964 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.625524 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCAGGC TGGTCGTGCG GGAGGCCTTG GCGTCCGTGA GGTCGCAGCC CGTTCTCTCG 
GCGGTCACCG TAGTCATGGT CCTGGGCATG GTGCTGGCGG TGATGCTGAC CACGGGACGG
ACCGTGGGCG CGGAGCAGCG GGTCCTGTCG ACCATCGACT CCGAGGGGAC CCGGACGATC
GTCGTGCGGG CAGAGGCCGA GGCGGGTCTG ACCAGCAGCG CCATCGACCG CATGAGCGGC
ATCGAGGGCA TCGAGTGGCT CGGGGGCTTC TCCGCGGCGG TCGACGCCAC GAACTCGGCG
GTCCCAGAGG GCAAGACGAC GCCGGTCCGA TCGCTGTACG GAGGGGACCT CGAGCGGCTC
GGTGTGCCAC CGGCATCGCC CATCCCGGGC GGGCTCGCGT GGGCGTCCCC GCAGGCCTTG
CAGGACCTGG GCATGCCCGA TGCCAGCGGA GGAGTCACGG CGACCTCCGG CACGTCCTAC
GGAGTGGCCG GTGAGCTCGA CGTGCCCGAC TTCCTGGAGG AGCTCGAACC CCTGGTGATC
GTCCCCCAAC CGGACGCCAG GGGGGACGAA CGGTTGAGCA CCATCGTGGT GATCGCCCGC
ACGCCGGAGC TGGTCCCCGC CGTCGGCGAT GCCGTGATGT CGGTGGCCGC GGCAGATGAC
CCCTCCAAGC TCAGCCTGCA GACCAGCGAG AACCTCGCGG CCCTGCGGTC CCTCGTCGGA
GGCCAGCTCG GGTCCTTCTC CCGGGGTCTT GTGCTCGCCT TGCTGGCTGT CACCGGTGGT
CTGCTGGCCG TCCTGCTCTT CAGCCTGGTC ATGATGCGCC GCAAGGACTT CGGCCGGCGC
CGTGCGCTGG GTGCCAGCCG GGGCCTCATC GTGGGGTTGA TCCTGGCGCA GACGGCCGTC
CTGGCCGGGG TGGGTCTCAT GCTCGGCGTG GACGTCTCCG TGGCGGTGCT GCTGGCCACG
GCCGATCCCC TGCCCGGGGT GTCCTTCACG CTGGCGCTGT GCGTGCTGAC ACTGGCGACG
GCTCTACTGT CTGCGATCCT TCCGGCGGTG GTGGCTAGCC GACGGGAACC CATCCGCGAG
CTGCGCGTGC CCTGA
 
Protein sequence
MIRLVVREAL ASVRSQPVLS AVTVVMVLGM VLAVMLTTGR TVGAEQRVLS TIDSEGTRTI 
VVRAEAEAGL TSSAIDRMSG IEGIEWLGGF SAAVDATNSA VPEGKTTPVR SLYGGDLERL
GVPPASPIPG GLAWASPQAL QDLGMPDASG GVTATSGTSY GVAGELDVPD FLEELEPLVI
VPQPDARGDE RLSTIVVIAR TPELVPAVGD AVMSVAAADD PSKLSLQTSE NLAALRSLVG
GQLGSFSRGL VLALLAVTGG LLAVLLFSLV MMRRKDFGRR RALGASRGLI VGLILAQTAV
LAGVGLMLGV DVSVAVLLAT ADPLPGVSFT LALCVLTLAT ALLSAILPAV VASRREPIRE
LRVP