Gene Ksed_09440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_09440 
Symbol 
ID8372453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp968058 
End bp969260 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content72% 
IMG OID644991225 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_003148755 
Protein GI256824795 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.0953135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.6485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGA ACACCACCGT CATCGTCTCC GGTGCCCGTA CCCCGATGGG CCGCATGCAG 
GGCGCCCTGG GCAGCCTGTC CGGCGCCGAG CTGGGTGGCC ACGCCATCGC CGCGGCGCTC
GAGCGGGGCA AGGTCGACCC CGCATCGGTC GACTACGTGA TCATGGGCCA GGTGCTCACC
GCCGGCGCCG GGCAGATCCC GGCGCGCCAG GCCGCCGTGA ACGCCGGCAT CTCGATGGAC
GTCCCGGCGC TGACGATCAA CAAGGTGTGC CTCTCGGGGC TGGACGCGAT CGCGCTGGCC
GACCAGACCA TCCGCGCCGG GGAGTTCGAG TGCGTCGTGG CCGGCGGCCA GGAGTCCATG
ACGAACGCCC CGCACCTGCT GCCGAAGTCC CGTGGCGGGT TCAAGTACGG CGACGTCACG
CTCAAGGACC ACATGGACCT CGACGGCCTG TGGGACGCCT TCACCGACCA GGCGATGGGG
GGTCTCACCG AGTCCGCCAA CCGCGAGGAC CGGGGCGGTG AGCTGACCCG CGAGGAGCAG
GACGCCTTCG CCGCCCAGTC CCACCAGCGC GCAGCCGCGG CCACCGAGAA GGGCATCTTC
CCCGAGGAGA TCACCCCGGT GAGCGTGCCG CAGCGCAAGG GCGACCCCCT CGAGGTCACC
ACCGACGAGG GCATCCGCCC CGACACGACC CCGGAGTCCC TCGCGAAGCT GCGCCCGGCC
TTCAGCCCCG AGGGCACCAT CACCGCGGGC TCGGCCTCGC AGATCTCCGA TGGCGCCGCC
GCCGTGGTGG TCATGAAGAA GTCCGCTGCC GAGGCCGCCG GCTTGGAGTG GATCGCCGAG
ATCGGGGCCC ACGGCGTGGT CTCCGGCCCG GACTCCAGCC TGCAGCTGCA GCCGGCCAAC
GCCATCCGCG CCGCCCTGGC CAAGGAGGGC CTGTCGGTCG AGGACGTGGA CCTGTTCGAG
ATCAACGAGG CCTTCGCCGC TGTCGGCATC GCCAGTGCCA AGGACCTGGG CGTGAGCGAG
GACATCGTCA ACGTCAACGG TGGCGCGATC GCCCTGGGCC ACCCCATCGG CATGTCGGGT
GCGCGGCTCG TCCTCAGCTT GGCCATGGAG CTCAAGCGTC GCGGCGGCGG CGTGGGCGTC
GCGGCCCTCT GTGGTGGTGG CGGTCAGGGT GACGCCCTGG TCGTCCGCGT GCCGAAGGCC
TGA
 
Protein sequence
MSENTTVIVS GARTPMGRMQ GALGSLSGAE LGGHAIAAAL ERGKVDPASV DYVIMGQVLT 
AGAGQIPARQ AAVNAGISMD VPALTINKVC LSGLDAIALA DQTIRAGEFE CVVAGGQESM
TNAPHLLPKS RGGFKYGDVT LKDHMDLDGL WDAFTDQAMG GLTESANRED RGGELTREEQ
DAFAAQSHQR AAAATEKGIF PEEITPVSVP QRKGDPLEVT TDEGIRPDTT PESLAKLRPA
FSPEGTITAG SASQISDGAA AVVVMKKSAA EAAGLEWIAE IGAHGVVSGP DSSLQLQPAN
AIRAALAKEG LSVEDVDLFE INEAFAAVGI ASAKDLGVSE DIVNVNGGAI ALGHPIGMSG
ARLVLSLAME LKRRGGGVGV AALCGGGGQG DALVVRVPKA