Gene Ksed_09400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_09400 
Symbol 
ID8372449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp963869 
End bp964942 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content70% 
IMG OID644991221 
Productpredicted permease 
Protein accessionYP_003148751 
Protein GI256824791 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.291782 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCGC ACCGCTCCGA CGCCCCGGTG AACCGCCTGC TCCGGCACGG CCCGTTCACG 
CTGGGTTTCG TCGCGACGCT CGGTGTGCTC ACGGCCGTGG GGACGGCCAT GGCCGCCCAA
CGGCTGGACT TCGTGATCAC CCTGCTGGTG GTCTCGGTCT TCCTGGCCCT CACCCTGAAC
CCGCTGGTGG AGCAGCTGAT GCTGCGCGGA CTGCGGCGCT CGGGGGCGGT CACCGTGGTG
TTCCTGTGGC TGCTGGTGGC GTTCACCGGC ATCGGAGCGC TGGTGCTGCC GCCCATCGTG
GACGAGTCCA CCGCGCTGCT GTACGACGCG CCCACCTACA CGCAGGCCTT CCTGGAGCAG
GACTGGGTGC AGCAAGCGGA CCGGGACTTC CAGTTGACGG ACCGGTTCCA GAACGAGCTG
CAGAAGCGCG TCAGCTCCGG GGAGCTGGCC GGGCAGGTGA CCGGTGGGGT GCTGGGGGCG
GGCCGGGTGC TGGCGACCGG TGCGTTCGGT GCGTTCACGG TGCTGGTGCT GACGCTGTAC
CTGCTGGCGA CGCTGCCGCA GACCAAGCGA GCCGGGTACG CCCTGGTGCC GGCCAGCCGG
CGCGAGCGCG TGGAGGAGCT GTCCGAGAAG ATCATGCGCC GGGTGGGTGG GTACGCCGCG
GGGCAGTTCC TGGTGGCCAC CATCAACGGA CTGTGCAGCT GGGTGATGAT GACCATCCTG
GGCATCCCGT ACGCCGCCGT GCTGGCCGTG CTGGTGGGAT TCCTCGGGCT GATCCCCCTG
GTGGGTGCCA CCATCGGCGC CGTGGTGGTG GGGCTCATCG CGCTGAGCCA ATCGGTGGAG
GTGGCACTGA TCGTGGGGGC CTACTACCTG ATCTACCAAC AGGTCGAGAA CTACGTCATC
GTGCCGAACA TCATGAAGCG GACGGTCTCG GTGCCGGGTG CGGTGACGGT GGTCGCGGCC
CTCATCGGGG GGACACTGGC CGGCATCCTG GGGGCGCTGC TGGCCATCCC CACCGCGGCG
GGACTGCTGC TCATCTACGA AGAGGTGCTG GTCCCCCGCC AGGCCCGCCG CTGA
 
Protein sequence
MSAHRSDAPV NRLLRHGPFT LGFVATLGVL TAVGTAMAAQ RLDFVITLLV VSVFLALTLN 
PLVEQLMLRG LRRSGAVTVV FLWLLVAFTG IGALVLPPIV DESTALLYDA PTYTQAFLEQ
DWVQQADRDF QLTDRFQNEL QKRVSSGELA GQVTGGVLGA GRVLATGAFG AFTVLVLTLY
LLATLPQTKR AGYALVPASR RERVEELSEK IMRRVGGYAA GQFLVATING LCSWVMMTIL
GIPYAAVLAV LVGFLGLIPL VGATIGAVVV GLIALSQSVE VALIVGAYYL IYQQVENYVI
VPNIMKRTVS VPGAVTVVAA LIGGTLAGIL GALLAIPTAA GLLLIYEEVL VPRQARR