Gene Ksed_09380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_09380 
Symbol 
ID8372447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp960942 
End bp961736 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content71% 
IMG OID644991219 
Productthymidylate synthase 
Protein accessionYP_003148749 
Protein GI256824789 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0207] Thymidylate synthase 
TIGRFAM ID[TIGR03284] thymidylate synthase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.21237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.43537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCAGT ACCTGGACTG GCTCACCGAC GTCCTCGAGA ACGGCACCCC CACCGAGGAC 
CGCACCGGCA CGGGCACCCT GTCGGTCTTC GGCCGGCAGA CCCGCTACGA CCTGGCCGCG
GGCTTCCCCC TGGTCACCAC GAAGAAGGTC TACCGCCGCG GGGTCGTGGG CGAGCTGCTG
TGGTTCCTCC GGGGCGACAC CAACGTCCGC TGGCTGCAGG AGCGCAAGAT CCACATCTGG
GACGAGTGGG CCGACGAGAA CGGCGACCTC GGCCCGGTCT ACGGCGCCCA GTGGCGCTCC
TGGCCCCGGC CCGACGGGGG CACGGTCGAC CAGATCGCGA AGGTCGTCGA GTCCCTCCGC
GCCCACCCCG CATCGCGCCG GCACATCGTC TCGGCCTGGA ACCCGGCGGA GGTCGACGAC
ATGGCCCTGC CTCCCTGCCA CGCGCTCTTC CAGTTCCACG TCTCCGGCGG GCGCCTGAGC
TGCCAGCTCT ACCAGCGCAG CGCCGACCTG TTCCTCGGCG TGCCCTTCAA CATCGCGTCC
TACGCCCTGC TGACGCACAT GGTCGCGCAC GTGACCGACC TGGAGGTCGG CGAGTTCGTG
CACACCGTGG GCGACCTGCA CCTGTACTCC AACCACCTGG AGCAGGCCCG CGAGCAGCTC
GCCCGTGAGC CCCGGCCACT GCCCCGCCTG GAGCTCAACC CCGCCGTGCG CGAGCTGGAC
GCCTTCGACC TCGATGACGT GACCTTCCAC GGGTACGACC CGCACCCGGC GATCAGCGCC
CCCATCGCGG TCTGA
 
Protein sequence
MRQYLDWLTD VLENGTPTED RTGTGTLSVF GRQTRYDLAA GFPLVTTKKV YRRGVVGELL 
WFLRGDTNVR WLQERKIHIW DEWADENGDL GPVYGAQWRS WPRPDGGTVD QIAKVVESLR
AHPASRRHIV SAWNPAEVDD MALPPCHALF QFHVSGGRLS CQLYQRSADL FLGVPFNIAS
YALLTHMVAH VTDLEVGEFV HTVGDLHLYS NHLEQAREQL AREPRPLPRL ELNPAVRELD
AFDLDDVTFH GYDPHPAISA PIAV