Gene Ksed_09370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_09370 
Symbol 
ID8372446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp960140 
End bp960910 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content72% 
IMG OID644991218 
Productdimethyladenosine transferase (rRNA methylation) 
Protein accessionYP_003148748 
Protein GI256824788 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0030] Dimethyladenosine transferase (rRNA methylation) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.258715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.963324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCATGA GCGACGACCT GCACGACGGG TGGTTCGGCG AGAGCATCGC TGCCGGGTAC 
GACGATCCCA CCGACCCTTG CAACGACCCG CACACCATCG CGCGGACCGT TGACCTGCTG
GCGGAGCTGG CCGATGGGGG GCCTGCGCTG GAGCTGGCCG TGGGCACCGG GCGCATCGCC
GCGCCCCTGG CCGAGCGTGG GGTGGTCGTA CACGGCATCG AGCTGAGCCG GGCGATGGCC
GGCCGCCTCG CCGACAAGCC CGGTGGGGAG CGGGTGGCAG TGACGATCGG GGACATGACC
ACCACCCGGG TGCCGGGGGA GTTCACTGTG GCCTACCTGG TCTTCAACAC CCTCAACAAC
CTCACGACCC AGGACGACCA GGTGCGGGCG TTCACGAACG CTGCGGCCCA CCTGCGGCCC
GGTGGCCGGT TCGTGGTCGA GGTCGGCATC CCGCCGCTGC GCCGGATGCC ACCGGGGCAG
GACACCGTGC CGTTCACGGT GGCGCCGGAC GGTGAGGGCG GTGGGTACGT GGGCTTCGAC
CAGCTGGACG TGGTGACCCA GGAGTTCCGC TCGCACCACG TCCGGGTCGG CGAGGTCAAC
CGGTTCCGCT CCGTCCCCTT CCGCTACGTG TGGCCCGCGG AGACCGACCT CATGGCCCGG
CTCGCCGGGA TGGCGCTCGA GCACCGCTGG GGCGGGTGGG ACCGGGCCCC GTTCACCGCC
GAGAGCACCT CCCACGTGTC CGTGTGGCGG AGGGTCGACA CCGACGTCTG A
 
Protein sequence
MVMSDDLHDG WFGESIAAGY DDPTDPCNDP HTIARTVDLL AELADGGPAL ELAVGTGRIA 
APLAERGVVV HGIELSRAMA GRLADKPGGE RVAVTIGDMT TTRVPGEFTV AYLVFNTLNN
LTTQDDQVRA FTNAAAHLRP GGRFVVEVGI PPLRRMPPGQ DTVPFTVAPD GEGGGYVGFD
QLDVVTQEFR SHHVRVGEVN RFRSVPFRYV WPAETDLMAR LAGMALEHRW GGWDRAPFTA
ESTSHVSVWR RVDTDV