| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_09250 |
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| Symbol | |
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| ID | 8372434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | + |
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| Start bp | 947719 |
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| End bp | 950247 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644991206 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_003148736 |
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| Protein GI | 256824776 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR02696] guanosine pentaphosphate synthetase I/polynucleotide phosphorylase
[TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGGGTC CTGAGATCAC CACCGCCGAA GCCGTCATCG ACAATGGCGC CTACGGCACC
CGCACCATCC GGTTCGAGAC CGGACGCCTG GCACAGCAGG CCGCTGGCTC TGTCGCCGCC
TACCTCGTCG AGGACGACAT CGACGACGCC ACCATGGTCC TGTCGACCAC CACCGCCGGC
AAGGAGCCGA AGGACCACTT CGACTTCTTC CCGCTGACCG TGGACGTCGA GGAGCGCATG
TACGCCGCGG GCCGCATCCC CGGCTCGTTC TTCCGGCGCG AGGGCCGTCC CGGCACCGAC
GCCATCCTGA CCTGCCGCCT GATCGACCGG CCGCTGCGCC CCACTTTCAC CAAGGGCCTG
CGCAACGAGG TCCAGGTCGT GGTGACCGTG CTCGCGCACC ACCCCGACCA CCAGTACGAC
GTGCTGGCCA TCAACGCCGC CAGCGCCTCC ACCCAGATCT CCGGTCTGCC GTTCTCCGGC
CCCATCGGTG GCGTGCGCAT CTCGCTCATC GACGGCCAGT GGGTGGCCTT CCCGAACTTC
TCGGACATCG CCCGCTCGAC CTTCGACATG GTCGTGGCCG GTCGCCTGAC CGATGACGGC
GACGTCGCCA TCATGATGGT CGAGGCCGAG TCCACCGAGT CCACCTGGGC CCTGGTGAAC
GACGAGGGCA AGACCGCCCC CACCGAGGAG GTCGTGTCCC AGGGGCTCGA GGCCTCCAAG
GTCTTCATCC GCGCGCTGTG CGAGGCGCAG GCCTCGCTCC ACGCCGCCGC AGGCAAGGAG
GTGCAGGAGT TCCCGACCTT CCTGGACTTC CAGGACGACG CCTACCAGGC CGTCGAGTCC
GCTGCCGAGA AGAACACCGC CGAGGCGCTG ACCATCGCCG GCAAGCAGGA GCGCGAGGGG
CGCCTGGACG AGATCAAGGA CTCCCTCAAG GCCGATCTGG CGGGTGCGGA CGAGGAGTCC
GGCAAGCCCT TCGCCGGGCG TGCCAAGGAG GTCTCCGCGG CCTTCAAGGC GCTGCAGAAG
AAGCTCATCC GCGAGCGCAT CCTGCGTGAC GGCGTCCGCA TCGACGGCCG TGGTCCGAAG
GACATCCGCG CGCTCTCCGC CGAGGTGCAG GCGCTGCCGC GCGTGCACGG CTCGGCCATC
TTCGAGCGCG GCGAGACCCA GATCATGGGT GTCACCACGC TGAACATGCT GCGCATGGAG
CAGCAGCTGG ACGGCCTGAA CCCGGTCACC CGCAAGCGCT ACATGCACAA CTACAACTTC
CCGCCCTACT CCACCGGTGA GACCGGTCGC GTCGGTTCGC CGAAGCGTCG CGAGATCGGC
CACGGTGCGC TCGCCGAGCG CGCCATCCTG CCGGTCCTGC CGAGCCGCGA GGAGTTCCCC
TACGCGATCC GCCAGGTCTC CGAGGCGCTG GGCTCCAACG GCTCGACCTC GATGGGGTCG
GTCTGCGCCT CCACGTTGTC GCTGCTGAAC GCCGGTGTGC CGCTGAAGGC ACCCGTTGCC
GGCATCGCCA TGGGCCTGGT CTCCGCGCAG GTCGACGGTG GCACCCGCTA CCAGGCGCTG
ACGGACATCC TCGGGGCCGA GGACGCCTTC GGTGACATGG ACTTCAAGGT GGCCGGCACG
AAGGACTTCG TGACCGCCAT CCAGCTGGAC ACCAAGCTCG ACGGCATCCC CGCCGAGGAG
CTGTCCAAGG CGCTGACCCA GGCTCGTGAG GCCCGCCTCC ACATCCTGGA CGTCATGTCC
CAGGCGATCG ACGCCCCGGA CGAGATGAGC CCCAACGCCC CGCGCGTCAT TGCGGTGAAG
GTGCCGGTCG ACAAGATCGG CGAGGTCATC GGCCCGAAGG GCAAGATGAT CAACCAGATC
CAGGAGGACA CCGGCGCCGA CATCTCGATC GAGGACGACG GCACCGTGTA CATCGGCGCG
ACCGACGGCC CCTCGGCCGA GGCGGCCCGT TCGGCGGTGA ACGCGATCGC CAACCCGCAG
ATGCCGGAGA TCGGCGAGCG CTTCCTGGGC ACCGTGGTGA AGACCACGAC GTTCGGTGCG
TTCATCTCGC TGCTGCCGGG CAAGGACGGT CTGCTGCACA TCTCCGAGAT CCGCAAGCTC
GTCGGCGGCA AGCGCATCGA CGCCGTCGAG GACGTGCTCA ACGTGGGCGA CAAGGTCCAG
GTGGAGCTCA AGGAGATCGA CCAGCGCGGC AAGCTGTCGC TGGGCGCGGT CGTGGCCGAG
GACGGCGAGG CTGCTGCGCA GGCTCCGCAG TCCGGCAAGA TCGGTGGCGG TTCCGCCGAC
CGCGGCGCCG CCGACGCGAC CTCCGTGGAG GACGACGCCG AGCGGCCGGC CCCGGTGACC
GTGGAGAACT CCATCACCGA CGACGACGCG CTGGAGGCCC AGGAGGCCAC CCAGTCGGCG
GTCGACGGTG AGGGCTCCGA CTCCTCCGAC GACTCCGAGG ACGAGGGCGG CGAGCGTCGT
CGTCCGCGCC GCCGTCGGGG CGCCCGTGGT GGGCGTGCCC GTGGCGGGTC CGAGGGTTCC
GAGGACTGA
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| Protein sequence | MEGPEITTAE AVIDNGAYGT RTIRFETGRL AQQAAGSVAA YLVEDDIDDA TMVLSTTTAG
KEPKDHFDFF PLTVDVEERM YAAGRIPGSF FRREGRPGTD AILTCRLIDR PLRPTFTKGL
RNEVQVVVTV LAHHPDHQYD VLAINAASAS TQISGLPFSG PIGGVRISLI DGQWVAFPNF
SDIARSTFDM VVAGRLTDDG DVAIMMVEAE STESTWALVN DEGKTAPTEE VVSQGLEASK
VFIRALCEAQ ASLHAAAGKE VQEFPTFLDF QDDAYQAVES AAEKNTAEAL TIAGKQEREG
RLDEIKDSLK ADLAGADEES GKPFAGRAKE VSAAFKALQK KLIRERILRD GVRIDGRGPK
DIRALSAEVQ ALPRVHGSAI FERGETQIMG VTTLNMLRME QQLDGLNPVT RKRYMHNYNF
PPYSTGETGR VGSPKRREIG HGALAERAIL PVLPSREEFP YAIRQVSEAL GSNGSTSMGS
VCASTLSLLN AGVPLKAPVA GIAMGLVSAQ VDGGTRYQAL TDILGAEDAF GDMDFKVAGT
KDFVTAIQLD TKLDGIPAEE LSKALTQARE ARLHILDVMS QAIDAPDEMS PNAPRVIAVK
VPVDKIGEVI GPKGKMINQI QEDTGADISI EDDGTVYIGA TDGPSAEAAR SAVNAIANPQ
MPEIGERFLG TVVKTTTFGA FISLLPGKDG LLHISEIRKL VGGKRIDAVE DVLNVGDKVQ
VELKEIDQRG KLSLGAVVAE DGEAAAQAPQ SGKIGGGSAD RGAADATSVE DDAERPAPVT
VENSITDDDA LEAQEATQSA VDGEGSDSSD DSEDEGGERR RPRRRRGARG GRARGGSEGS
ED
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