Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_09130 |
Symbol | valS |
ID | 8372422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 930606 |
End bp | 933263 |
Gene Length | 2658 bp |
Protein Length | 885 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644991194 |
Product | valyl-tRNA synthetase |
Protein accession | YP_003148724 |
Protein GI | 256824764 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0525] Valyl-tRNA synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0788672 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGACT CCACCGCCGG AACCCGCCCC GCCCAGCTGC CCGAGAAGCC GTCCGTCGAC GGCCTCGAGG ACCGGTGGAC GGGCGTATGG CAGGAGCAGG ACACCTATGC CTTCGACCGC GCCCGCGCCG CGTCGCTCCC CCGAGAGCAG CTGTTCACCA TCGACACCCC TCCCCCGACG GCCTCCGGGT CGCTCCACGT GGGGCACGTG TTCGGCTACA CGCAGGCCGA CTGCATGGCG CGCTACAAGC GCATGACCGG CGCGGAGGTC TTCTACCCCA TCGGCTGGGA CGACAACGGT CTGCCCACCG AGCGCCGGGT GCAGAACTAC TACGGCGTGC GCGGTGACAT CACCCAGCCC TACGTGGAGG GCTACGAGCC GCCGCAGCGC GGGGGCGACG GCAAGTCCAC CAAGGCCGCC GACCAGCAGC CGGTCAGCCG CCCCAACTTC ATCGAGCTGT GCCACGAGCT GACGGTCGAG GACGAGAAGG CCTTCGAGGC GCTCTTCCGC CGGTTGGGCC TCTCGCTGGA CTGGAACTAC CAGTACCGCA CCATCGACGA CAACGCCCGG GCCACCAGCC AGCAGGCCTT CCTGCGCAAC CTCCAGCGGG GCGAGGCCTA CTCCGCCGAG GCGCCGGGGC TGTGGGACGT CACCTTCCAG ACGGCCGTGG CCCAGGCCGA GCTCGAGGCC CGCGACTACC CGGGCGCCTA CCACCGCATC GCGTTCCACG GGCCGCAGGG AGACGTGGAG GTCGAGACCA CCCGTCCCGA GCTGCTCCCG GCGTGCGTCG CCCTCATCGC CCACCCCGAC GACGAGCGCT ACCAGGACCT GTTCGGCTCC ACGGTGCGCA CGCCGCTGTT CGGCGTGGAG GTGCCCGTCA TCGCCCACCC GGCCGCCGAG ATGGACAAGG GCGCCGGCAT CGCCATGTGC TGCACCTTCG GTGACCTCAC CGACGTCACC TGGTGGCGCG AGCTGCAGCT GCCGACGCGC TCGGTCATCA CCCGCAACGG GCGCCTCACC GGCGAGACCC CCGCGTGGCT GGCCGACGGC CCCGGTGCAC AGCTCTACGC CGAGCAGCTC GCGACCAAGA CCGTGCACAC CGCGCGGGAG AACACGGTCA CCGCGCTGCG CGAGTCCGGC GAGCTGGTGG GCGAGCCGGA GAAGACCCAG CGCAAGGCCA ACTTCTTCGA GAAGGGTGAC AAGCCGCTGG AGATCGTGAC CTCCCGCCAG TGGTACATCC GTAACGGTGG GCGCGATGCG GAGCTGAACC GCGCCCTCAT CGAGCGCGGG GCCGAGGTGG ACTTCCACCC GGCCTACATG GAGCGCCGCC ACGCCAACTG GATCGAGGGC CTCAACGGCG ACTGGCTGGT CAGCCGCCAG CGCTTCTTCG GGGTGCCCTT CCCCATCTGG TACCCGCTGG ACGCCGACGG CGAGCCGGAC CACGAGAACC CCATCACGCC CGCCGAGGCC GACCTGCCCG TGGACCCGCA GACCGACACC GCACCGGGTT TCGAGGAGTC CCAGCGCGAC CAGCCGGGCG GGTTCGCCGC CGACCCGGAC GTGCTCGACA CCTGGGCCAC CAGCTCGCTG AGCCCGCAGA TCATCGGCGG GTGGCGCAAC GACCCCGAGC TGTTCGAGAT GGTCTTCCCG ATGGACATGC GCCCGCAGGG ACACGACATC ATCCGCACCT GGCTGTTCTC CACCATCGTG CGCGCCCACC ACGAGCACGG CACCGTGCCG TGGTGGAACG CCACCTTGAA CGGCTGGATC CTGGACCCGG ACCGCAAGAA GATGTCCAAG TCCAAGGGCA ACGTGGTCAC CCCGGTGGAC CTGCTCGAGG AGCACGGGTC CGATGCGGTG CGCTACTGGG CGGCCTCGGC CCGCCAGGGC GTGGACACCG CCTTCGACGC CCAGCAGATG AAGGTCGGCC GCCGGTTGGC CATCAAGCTC CTGAACGCCT CGAAGTTCGC CCTCGGCTTC GGCGAGGTGG ACGGTGCCGA GCACCCGGAA CAGCTGCTCG CGCAGGTGAC CGAGCCGGTG GACCAGTCGC TGCTGCTGGA GCTGGCGCGG GTGGTCGAGC AGGCCACCGC GGGCTTTGAG GCCTGGGACT ACACCAAGGC CCTCGAGGTG ACCGAGGCGT TCTTCTGGTC GTTCTGCGAC GACTACCTGG AGCTGGTCAA GGCCCGCGCC TACGGGGGCG ACGAGGTCGA GGCCTCCGCG GCGACCACGA GCGCGCGCGC CGCCCTGCGG GTGGCCCTGG ACGTGCAGCT GCGCCTGCTG GCCCCCTTCA TCCCGTTCGC GACCGAGGAG GTCTGGAGCT GGTGGCACAG CGGCTCCGTG CACCGCGCCG CCTGGCCCAC CGCCGACGAG GTGCGCCCAG CCAACCTGGC GGACGTCAAC GTGGCGGGGG TGAAGCCGGC CGCTGCCGCC GTGCTCGCCG GCATCCGCAA GGCCAAGTCC GAGGCGAAGT TGGGCATGCG CGCCCAGGTG ACGGCCATGA CGCTGGCCGG CCCCGCCGAG CAGCGGGCCG CCGCCCGCCG GGCCTGGGAC GACGTCGTGG CCTCCGGGCA CGTGGTGTGC GAGGTGGCCG AGGTCGACGC CGAGGAGCTC GAGGTGCGTG ACACCGAGCT GCTGAAGGTG GAGAAGCCGA AGGCCTGA
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Protein sequence | MTDSTAGTRP AQLPEKPSVD GLEDRWTGVW QEQDTYAFDR ARAASLPREQ LFTIDTPPPT ASGSLHVGHV FGYTQADCMA RYKRMTGAEV FYPIGWDDNG LPTERRVQNY YGVRGDITQP YVEGYEPPQR GGDGKSTKAA DQQPVSRPNF IELCHELTVE DEKAFEALFR RLGLSLDWNY QYRTIDDNAR ATSQQAFLRN LQRGEAYSAE APGLWDVTFQ TAVAQAELEA RDYPGAYHRI AFHGPQGDVE VETTRPELLP ACVALIAHPD DERYQDLFGS TVRTPLFGVE VPVIAHPAAE MDKGAGIAMC CTFGDLTDVT WWRELQLPTR SVITRNGRLT GETPAWLADG PGAQLYAEQL ATKTVHTARE NTVTALRESG ELVGEPEKTQ RKANFFEKGD KPLEIVTSRQ WYIRNGGRDA ELNRALIERG AEVDFHPAYM ERRHANWIEG LNGDWLVSRQ RFFGVPFPIW YPLDADGEPD HENPITPAEA DLPVDPQTDT APGFEESQRD QPGGFAADPD VLDTWATSSL SPQIIGGWRN DPELFEMVFP MDMRPQGHDI IRTWLFSTIV RAHHEHGTVP WWNATLNGWI LDPDRKKMSK SKGNVVTPVD LLEEHGSDAV RYWAASARQG VDTAFDAQQM KVGRRLAIKL LNASKFALGF GEVDGAEHPE QLLAQVTEPV DQSLLLELAR VVEQATAGFE AWDYTKALEV TEAFFWSFCD DYLELVKARA YGGDEVEASA ATTSARAALR VALDVQLRLL APFIPFATEE VWSWWHSGSV HRAAWPTADE VRPANLADVN VAGVKPAAAA VLAGIRKAKS EAKLGMRAQV TAMTLAGPAE QRAAARRAWD DVVASGHVVC EVAEVDAEEL EVRDTELLKV EKPKA
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