Gene Ksed_09130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_09130 
SymbolvalS 
ID8372422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp930606 
End bp933263 
Gene Length2658 bp 
Protein Length885 aa 
Translation table11 
GC content71% 
IMG OID644991194 
Productvalyl-tRNA synthetase 
Protein accessionYP_003148724 
Protein GI256824764 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0525] Valyl-tRNA synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0788672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACT CCACCGCCGG AACCCGCCCC GCCCAGCTGC CCGAGAAGCC GTCCGTCGAC 
GGCCTCGAGG ACCGGTGGAC GGGCGTATGG CAGGAGCAGG ACACCTATGC CTTCGACCGC
GCCCGCGCCG CGTCGCTCCC CCGAGAGCAG CTGTTCACCA TCGACACCCC TCCCCCGACG
GCCTCCGGGT CGCTCCACGT GGGGCACGTG TTCGGCTACA CGCAGGCCGA CTGCATGGCG
CGCTACAAGC GCATGACCGG CGCGGAGGTC TTCTACCCCA TCGGCTGGGA CGACAACGGT
CTGCCCACCG AGCGCCGGGT GCAGAACTAC TACGGCGTGC GCGGTGACAT CACCCAGCCC
TACGTGGAGG GCTACGAGCC GCCGCAGCGC GGGGGCGACG GCAAGTCCAC CAAGGCCGCC
GACCAGCAGC CGGTCAGCCG CCCCAACTTC ATCGAGCTGT GCCACGAGCT GACGGTCGAG
GACGAGAAGG CCTTCGAGGC GCTCTTCCGC CGGTTGGGCC TCTCGCTGGA CTGGAACTAC
CAGTACCGCA CCATCGACGA CAACGCCCGG GCCACCAGCC AGCAGGCCTT CCTGCGCAAC
CTCCAGCGGG GCGAGGCCTA CTCCGCCGAG GCGCCGGGGC TGTGGGACGT CACCTTCCAG
ACGGCCGTGG CCCAGGCCGA GCTCGAGGCC CGCGACTACC CGGGCGCCTA CCACCGCATC
GCGTTCCACG GGCCGCAGGG AGACGTGGAG GTCGAGACCA CCCGTCCCGA GCTGCTCCCG
GCGTGCGTCG CCCTCATCGC CCACCCCGAC GACGAGCGCT ACCAGGACCT GTTCGGCTCC
ACGGTGCGCA CGCCGCTGTT CGGCGTGGAG GTGCCCGTCA TCGCCCACCC GGCCGCCGAG
ATGGACAAGG GCGCCGGCAT CGCCATGTGC TGCACCTTCG GTGACCTCAC CGACGTCACC
TGGTGGCGCG AGCTGCAGCT GCCGACGCGC TCGGTCATCA CCCGCAACGG GCGCCTCACC
GGCGAGACCC CCGCGTGGCT GGCCGACGGC CCCGGTGCAC AGCTCTACGC CGAGCAGCTC
GCGACCAAGA CCGTGCACAC CGCGCGGGAG AACACGGTCA CCGCGCTGCG CGAGTCCGGC
GAGCTGGTGG GCGAGCCGGA GAAGACCCAG CGCAAGGCCA ACTTCTTCGA GAAGGGTGAC
AAGCCGCTGG AGATCGTGAC CTCCCGCCAG TGGTACATCC GTAACGGTGG GCGCGATGCG
GAGCTGAACC GCGCCCTCAT CGAGCGCGGG GCCGAGGTGG ACTTCCACCC GGCCTACATG
GAGCGCCGCC ACGCCAACTG GATCGAGGGC CTCAACGGCG ACTGGCTGGT CAGCCGCCAG
CGCTTCTTCG GGGTGCCCTT CCCCATCTGG TACCCGCTGG ACGCCGACGG CGAGCCGGAC
CACGAGAACC CCATCACGCC CGCCGAGGCC GACCTGCCCG TGGACCCGCA GACCGACACC
GCACCGGGTT TCGAGGAGTC CCAGCGCGAC CAGCCGGGCG GGTTCGCCGC CGACCCGGAC
GTGCTCGACA CCTGGGCCAC CAGCTCGCTG AGCCCGCAGA TCATCGGCGG GTGGCGCAAC
GACCCCGAGC TGTTCGAGAT GGTCTTCCCG ATGGACATGC GCCCGCAGGG ACACGACATC
ATCCGCACCT GGCTGTTCTC CACCATCGTG CGCGCCCACC ACGAGCACGG CACCGTGCCG
TGGTGGAACG CCACCTTGAA CGGCTGGATC CTGGACCCGG ACCGCAAGAA GATGTCCAAG
TCCAAGGGCA ACGTGGTCAC CCCGGTGGAC CTGCTCGAGG AGCACGGGTC CGATGCGGTG
CGCTACTGGG CGGCCTCGGC CCGCCAGGGC GTGGACACCG CCTTCGACGC CCAGCAGATG
AAGGTCGGCC GCCGGTTGGC CATCAAGCTC CTGAACGCCT CGAAGTTCGC CCTCGGCTTC
GGCGAGGTGG ACGGTGCCGA GCACCCGGAA CAGCTGCTCG CGCAGGTGAC CGAGCCGGTG
GACCAGTCGC TGCTGCTGGA GCTGGCGCGG GTGGTCGAGC AGGCCACCGC GGGCTTTGAG
GCCTGGGACT ACACCAAGGC CCTCGAGGTG ACCGAGGCGT TCTTCTGGTC GTTCTGCGAC
GACTACCTGG AGCTGGTCAA GGCCCGCGCC TACGGGGGCG ACGAGGTCGA GGCCTCCGCG
GCGACCACGA GCGCGCGCGC CGCCCTGCGG GTGGCCCTGG ACGTGCAGCT GCGCCTGCTG
GCCCCCTTCA TCCCGTTCGC GACCGAGGAG GTCTGGAGCT GGTGGCACAG CGGCTCCGTG
CACCGCGCCG CCTGGCCCAC CGCCGACGAG GTGCGCCCAG CCAACCTGGC GGACGTCAAC
GTGGCGGGGG TGAAGCCGGC CGCTGCCGCC GTGCTCGCCG GCATCCGCAA GGCCAAGTCC
GAGGCGAAGT TGGGCATGCG CGCCCAGGTG ACGGCCATGA CGCTGGCCGG CCCCGCCGAG
CAGCGGGCCG CCGCCCGCCG GGCCTGGGAC GACGTCGTGG CCTCCGGGCA CGTGGTGTGC
GAGGTGGCCG AGGTCGACGC CGAGGAGCTC GAGGTGCGTG ACACCGAGCT GCTGAAGGTG
GAGAAGCCGA AGGCCTGA
 
Protein sequence
MTDSTAGTRP AQLPEKPSVD GLEDRWTGVW QEQDTYAFDR ARAASLPREQ LFTIDTPPPT 
ASGSLHVGHV FGYTQADCMA RYKRMTGAEV FYPIGWDDNG LPTERRVQNY YGVRGDITQP
YVEGYEPPQR GGDGKSTKAA DQQPVSRPNF IELCHELTVE DEKAFEALFR RLGLSLDWNY
QYRTIDDNAR ATSQQAFLRN LQRGEAYSAE APGLWDVTFQ TAVAQAELEA RDYPGAYHRI
AFHGPQGDVE VETTRPELLP ACVALIAHPD DERYQDLFGS TVRTPLFGVE VPVIAHPAAE
MDKGAGIAMC CTFGDLTDVT WWRELQLPTR SVITRNGRLT GETPAWLADG PGAQLYAEQL
ATKTVHTARE NTVTALRESG ELVGEPEKTQ RKANFFEKGD KPLEIVTSRQ WYIRNGGRDA
ELNRALIERG AEVDFHPAYM ERRHANWIEG LNGDWLVSRQ RFFGVPFPIW YPLDADGEPD
HENPITPAEA DLPVDPQTDT APGFEESQRD QPGGFAADPD VLDTWATSSL SPQIIGGWRN
DPELFEMVFP MDMRPQGHDI IRTWLFSTIV RAHHEHGTVP WWNATLNGWI LDPDRKKMSK
SKGNVVTPVD LLEEHGSDAV RYWAASARQG VDTAFDAQQM KVGRRLAIKL LNASKFALGF
GEVDGAEHPE QLLAQVTEPV DQSLLLELAR VVEQATAGFE AWDYTKALEV TEAFFWSFCD
DYLELVKARA YGGDEVEASA ATTSARAALR VALDVQLRLL APFIPFATEE VWSWWHSGSV
HRAAWPTADE VRPANLADVN VAGVKPAAAA VLAGIRKAKS EAKLGMRAQV TAMTLAGPAE
QRAAARRAWD DVVASGHVVC EVAEVDAEEL EVRDTELLKV EKPKA