Gene Ksed_09100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_09100 
Symbol 
ID8372419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp927661 
End bp928383 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content69% 
IMG OID644991191 
ProductATP-dependent Clp protease proteolytic subunit ClpP 
Protein accessionYP_003148721 
Protein GI256824761 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.048954 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCTCC CCCTCGACCC CGCCTCGCGC GGCCAGCACA CCCCCACGCC GATGATGCAC 
GGAGGAACCA TGAACCACCC CGGCGCCCAG GGCCGTCTGC ACGTGCCCGG CCCCTCGTCC
CGCTACGTGC TCCCGCAGTT CGAGGAGCGC ACCGCCTACG GCACCAAGCG CCAGGACCCG
TACACCAAGC TGTTCGAGGA CCGCATCATC TTCTGCGGCG TGCAGATCGA CGACGCCTCG
GCGGACGACA TCATCGCCCA GCTGCTGGTC CTGGAGTCCC AGGACCCGGA CCGCGACGTG
CTGATGTACA TCAACTCCCC GGGTGGCTCC TTCACGGCGA TGACGGCCAT CTACGACACG
ATGCAGTTCA TCCGTCCCGA CGTGCAGACC TTCGTGCTGG GGCAGGCCGC CTCGGCCGGT
GCGGTGCTGC TCGCCGCCGG GGCGCCGGGC AAGCGCTTCG CCCTGCCGAA CTCGCGCATC
CTCATCCACC AACCCGCCAT GGAGGGCATG GGCGGTATGG CCTCCGATCT GGAGATCACC
GCCAACGAGG TGCTGCGCAT GCGCACCTGG CTGGAGGAGA CCTGGGCCAA GCACTCGGGC
CAGACGCCGG AGAAGGTCCG CAAGGACATC GAGCGCGACA AGATCCTCTC GGCTGCCGAG
GCACAGGAGT ACGGGCTCGT CGACGCTGTG CTGCCCAGCC GCAAGGCCGC GCTGGAGGGC
TGA
 
Protein sequence
MNLPLDPASR GQHTPTPMMH GGTMNHPGAQ GRLHVPGPSS RYVLPQFEER TAYGTKRQDP 
YTKLFEDRII FCGVQIDDAS ADDIIAQLLV LESQDPDRDV LMYINSPGGS FTAMTAIYDT
MQFIRPDVQT FVLGQAASAG AVLLAAGAPG KRFALPNSRI LIHQPAMEGM GGMASDLEIT
ANEVLRMRTW LEETWAKHSG QTPEKVRKDI ERDKILSAAE AQEYGLVDAV LPSRKAALEG