Gene Ksed_08640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_08640 
Symbol 
ID8372373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp878613 
End bp879938 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content76% 
IMG OID644991148 
Producthypothetical protein 
Protein accessionYP_003148683 
Protein GI256824723 
COG category[S] Function unknown 
COG ID[COG3214] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.00452751 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGGGC ACCCGGTCTA CGGTGACCGG GTGCCCGCTC CGCTGTCCGC TCACACGCCC 
GAACCATCCG GCCAGACCGG CTCCTCCCGC CCGCCGCGCC TGACCCTGCG GGCGGCCCGC
CGCATCGCGT TGCTCTCGCA GGGCTTCGGC AGGCGGCGCC CGGAGCCGCT GGGTCAGTCG
CACCTCCTGG CGGTGGTGCG GCGCATGGGC ATCGTGCAGA TCGACTCGGT GAACGTGCTG
GTGCGCAGCC AGTACCTGCC GCTGTTCGCC CGCCTCGGCC CCTACGACCG GTCGCTCCTG
GACGGCCTGC GCGACGGCCG GGGACCCTCC GGGCGTCGGA CCCGGCACCG GCTGGTGGAG
TACTGGGCCC ACGAGGCCTC CCTGGTGCCG GTGGAGGACT GGCCGTTGTA CGGCTTCCGC
ATGCGGCGGG CCCACGAGGA CGCCTGGGGA GGCATGCGCC GGGTGGCCGC CGAGCACCCC
GACCTGGTCG ATGAGGTGCA GCGGGTCGTG GTCCAGCGGG GGCCGATCTC CGCAGCCCGC
ATCGAGGACC TGCTCGAGCA CGCCGAGGAG GTGGGCCGCG AGCACTGGGG GTGGAACTGG
TCGCTGGTCA AGGCGGCCTG CGAGCACCTG TTCTGGGCCG GCCGCATCAC CTCGGCCGGG
CGCGGGTCCG CCTTCGAGCG GCTGTACGCG GCCCCCGAGG CGGTGCTCCC GCCCGATGCG
GTGACGGCCG GGCCGCTGGG CGAGTCCCCC CTGTCCGAGG ACGAGGCGTT CATCCGACTG
GTGCGGCGGG CGGCGGTGGC CCACGGCATC GGGACCCTTC GGTGCCTGCG GGACCACGCG
CGGCTCTCGG TGGCGCAGGC GGCTCCGGCG GTCGAGCGTC TGCTCGCCTC CGGGGAGCTG
CAGGAGGTGG AGGTGCCGGG CTGGTCGCGT GCGGGCGCGC CGGTGTACCT CCACCGCGAC
GCGCCGCGCC CGCGTCCGGT GGGTGCCCGT GCTCTGCTCA GCCCGTTCGA CCCGGTCGTG
TGGCAGCGGG AGCGGGCCGA GGCGCTGTTC GGCTTCCGCT ACCGCATCGA GATCTACACC
CCGGCCGAGC AGCGGGTGCA CGGGTACTAC GTGCTGCCCT TCCTGTTCGG CGACGACCTG
GTGGCCCGGG TGGACCTCAA GGCCGACCGC GCCGCCGGGG TGCTCCGGGC GCCGGCCGTG
CACCTGGAGC CCGGCTGCCC GCCCGAGGCC GTGCCGGCCC TGCACGAGGC GCTCGCGGAG
ATGGCCGGCT GGCTGGGGCT GGACCGCGTG GAGGCCGCCG ACGCGGTGGA GTCACCCGTC
GCCTGA
 
Protein sequence
MGGHPVYGDR VPAPLSAHTP EPSGQTGSSR PPRLTLRAAR RIALLSQGFG RRRPEPLGQS 
HLLAVVRRMG IVQIDSVNVL VRSQYLPLFA RLGPYDRSLL DGLRDGRGPS GRRTRHRLVE
YWAHEASLVP VEDWPLYGFR MRRAHEDAWG GMRRVAAEHP DLVDEVQRVV VQRGPISAAR
IEDLLEHAEE VGREHWGWNW SLVKAACEHL FWAGRITSAG RGSAFERLYA APEAVLPPDA
VTAGPLGESP LSEDEAFIRL VRRAAVAHGI GTLRCLRDHA RLSVAQAAPA VERLLASGEL
QEVEVPGWSR AGAPVYLHRD APRPRPVGAR ALLSPFDPVV WQRERAEALF GFRYRIEIYT
PAEQRVHGYY VLPFLFGDDL VARVDLKADR AAGVLRAPAV HLEPGCPPEA VPALHEALAE
MAGWLGLDRV EAADAVESPV A