Gene Ksed_08600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_08600 
Symbol 
ID8372369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp873423 
End bp875039 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content73% 
IMG OID644991144 
Productsignal transduction histidine kinase 
Protein accessionYP_003148679 
Protein GI256824719 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.890839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.98586 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCACA AGCCGTTCGC CGTGACCCGG TCGGGCCTCG GCGCCGTCGT CCGCGCGTGG 
CGGACGTCCC TGCGCTTCCG CACCATCATC GTCAGCCTGG TGCTGACCGC GCTGCTGTCG
CTGGTGCTCG GCGCCACGCT GTACCAGACC ATCGGGGAGC GCCTGCTGCG CAACCGGGTG
GACGCGGCGA TGGCGGAGTC GGTCACGACC GTCGCAGCGG CCCAGCGGCA GTTCGACGCG
CTGGACCGCA CGGACAACTC GACCCTCTAC ACCACGGCTA CCGACGTCGT GCGGCTGAGC
TCCAGCCCCG GTGACGACCG GTCGGTGCGG GCGGCGGTGG TCCGGGGGCT GGGCAACGAG
GCAGGCCTCT CGCCGGTGGA GCGTCCCGAT GCAGAGGTCT CCGACGTGCC GGACGTCCTG
CGGGAGCGGC TGCGGGAGGA GCCCGACCAC GTCCACTCGA TGGTCACGCG GGCCACGGCG
GGGGAGGACG GGTCGTCGGC CTCGGTGCTG GTCGCGGCCC GGCTGGACGT CCCCGGAGCG
GGGCCGCACG ACCTCATCCT GTTCCACTCG CTGGAGAACG AGGAACGGTC GCTGGACATC
GTGCGCTCCT CGTTCGCGCT GGGCGGCCTG GGCCTCATCG GCATCGCCGG ACTCATCACC
TTCGTGGTCA CCCACATCGC CCTCGAGCCG TTGTCCCGGG TCACCCGCAC CGCCGAGCAC
ATCGCGACCG GCGAGCTGGA CCGGCGCACC CGGATGCGGG GGCACGACGA GCTCGCCCGG
CTCGGCAAGG CGGTCGACAC GATGGCGGAC GCTGCCCAGC GGCAGATCAT CGAGCTCCGG
GACCTGTCGC ACCTCCAACA GCGATTCGTC AGCGACGTCA GCCACGAGCT GCGAACGCCG
CTGACCACCA TCCGCATGGC CAGCGAGGTG CTCCACTCCG ACCGCGACGA GCTCGACCCG
GTGGGTTCGC GCTCGGTCGA GCTCCTGCAC GGGGAGGTGG AGCGTCTCGA CCAGCTGCTG
ACCGACCTGC TGGAGATCTC CCGCCAGGAC GCCGGCCAGG TGCAGCTCCA GCACTTGGAG
GTGGACCTGG GGGAGTTGGC CGAGCGGGTG GTGCAGAACC ACGCCCAGCT CGCGGCCAAT
GCCGGGGTGG ACCTCCGGGT GGAGCGACCG GAGGTCTCGG CGGCGGTCGT GGCCGAGGTG
GACGAGCGTC GGATCGAGCG GGTGCTGCGC AACCTGGTCG TCAACGCCAT CGACCACGCC
GAGGGCGAGC CGGTCGTCGT GCGCCTTGAC GGCAACTACG CCGCGGTGGC CATCGCCGTC
TCTGACAGCG GGGTGGGCAT GGACGACGCC CAGATGGACC GGGTTTTCGA CCGCTTCTGG
CGGGCGGACC CTGCCCGCAC GCGCACCGCG GGAGGGTCGG GCCTGGGGCT GAGCATCTGT
GCGGGGGACG CGCGGGAGCA CCGGGGGTGG TTGCAGGTCT CGTCGCGCCC GGGGCAGGGA
GCCACCTTCC GCCTCACCGT GCCCCGTCGT GCGGGGGAGG CCGTGACCGG CTCGCCCATC
CCGCTGCGGG CCCCGCACCC GAGCAACGAC GACTGCCGCC GCGCGACCGA GGAGTAG
 
Protein sequence
MAHKPFAVTR SGLGAVVRAW RTSLRFRTII VSLVLTALLS LVLGATLYQT IGERLLRNRV 
DAAMAESVTT VAAAQRQFDA LDRTDNSTLY TTATDVVRLS SSPGDDRSVR AAVVRGLGNE
AGLSPVERPD AEVSDVPDVL RERLREEPDH VHSMVTRATA GEDGSSASVL VAARLDVPGA
GPHDLILFHS LENEERSLDI VRSSFALGGL GLIGIAGLIT FVVTHIALEP LSRVTRTAEH
IATGELDRRT RMRGHDELAR LGKAVDTMAD AAQRQIIELR DLSHLQQRFV SDVSHELRTP
LTTIRMASEV LHSDRDELDP VGSRSVELLH GEVERLDQLL TDLLEISRQD AGQVQLQHLE
VDLGELAERV VQNHAQLAAN AGVDLRVERP EVSAAVVAEV DERRIERVLR NLVVNAIDHA
EGEPVVVRLD GNYAAVAIAV SDSGVGMDDA QMDRVFDRFW RADPARTRTA GGSGLGLSIC
AGDAREHRGW LQVSSRPGQG ATFRLTVPRR AGEAVTGSPI PLRAPHPSND DCRRATEE