Gene Ksed_08490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_08490 
Symbol 
ID8372358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp863978 
End bp864652 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content68% 
IMG OID644991133 
Productbutyryl-CoA:acetate CoA transferase 
Protein accessionYP_003148668 
Protein GI256824708 
COG category[I] Lipid transport and metabolism 
COG ID[COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 
TIGRFAM ID[TIGR02428] 3-oxoacid CoA-transferase, B subunit 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.506696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTCA CCCGTGAGCA GATGGCCGCC CGTGCAGCCC AGGAGCTGCA GGACGGCGAC 
TACGTGAACC TGGGCATCGG CCTGCCGACG CTGGTGCCGA ACTACGTGGA CGACGACGTG
GAGCTGGTGC TCCAGTCGGA GAACGGCATC CTCGGCGTGG GCCGCTACCC CACCGAGGAG
GAGCTGGACG CCGACCTCAT CAACGCGGGC AAGGAGACAG TGACCGTCCG CCGTGGCGCG
AGCTTCTTCG ACTCCTCGCT GAGCTTCGGC ATGATCCGGG GCGGCAAGAT CGACGCCGCC
ATCCTGGGCG CCATGCAGGT CTCGGCCACC GGCGACATCG CCAACTGGAT GATCCCCGGC
AAGATGGTCA AGGGCATGGG CGGCGCCATG GACCTGGTGC ACGGCGCCAA GAAGGTCATC
GTGCTCATGG AGCACGTGGC CAAGGACGGC TCCCACAAGA TCGTGCAGGA GTGCTCCCTG
CCGCTGACGG GCAAGCAGGT GGTGCAGCGC ATCATCACCG ACCTGTGCGT CATGGACGTC
ACCGAGGACG GCCTGGTGCT CCGCGAGCTG GCCGCCGACG TGACCGAGGA GCAGGTCCGC
GAGGCCACCG GGCCGGACTT CCGGGTAGAG CTGAACGACA CCCCCATCGA GGACGAGGTC
TCCGACCAGA CGTGA
 
Protein sequence
MALTREQMAA RAAQELQDGD YVNLGIGLPT LVPNYVDDDV ELVLQSENGI LGVGRYPTEE 
ELDADLINAG KETVTVRRGA SFFDSSLSFG MIRGGKIDAA ILGAMQVSAT GDIANWMIPG
KMVKGMGGAM DLVHGAKKVI VLMEHVAKDG SHKIVQECSL PLTGKQVVQR IITDLCVMDV
TEDGLVLREL AADVTEEQVR EATGPDFRVE LNDTPIEDEV SDQT