Gene Ksed_08420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_08420 
Symbol 
ID8372351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp858052 
End bp858636 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content75% 
IMG OID644991126 
Productphosphoribosylaminoimidazole carboxylase, PurE protein 
Protein accessionYP_003148661 
Protein GI256824701 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.319221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.257896 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCACC TGCGCGACAC AGCGCCCGCC GACGTCTCGA TCGTCATGGG CTCCGACAGC 
GACTGGCCCG TGATGGCGGC CGCCGCCGAG GCCCTGGAGG AGCTCGGTAT CAGCCACACC
GTCCAGGTGG TCTCCGCCCA CCGCATGCCC CACGAGATGC TCCAGCACGG CGTGGACGCC
GCCGCGGCGG GCTACCGCGT GGTCATCGCC GGGGCGGGAG GCGCGGCCCA CCTGCCGGGC
ATGCTGGCCA GCGTGACGCC GTTGCCGGTG ATCGGGGTCC CGGTGCCGCT GAAGCAGCTC
GACGGCCTGG ACTCGCTGCT GTCGATCGTG CAGATGCCCG CCGGCGTGCC GGTCGCCACC
GTCTCCGTCG GGGGAGCCCG CAACGCGGGG CTCCTGGCCG CCCGCATCCT GGCCGCCGGC
ACCGACGAGC AGGCCCTGGC GCTGCGCTCC CGCATCGAGG CGTTCCAGGA GTCCCTGCGC
GACGCGGCCC ACGCCAAGGG GCAGGCACTC GCGCGTAGGC TGCACGCGGC GGACGAGGAG
CGTCCGCCGG CCACCACCCT CACCCCGACC CCCGAGGACA GTTGA
 
Protein sequence
MTHLRDTAPA DVSIVMGSDS DWPVMAAAAE ALEELGISHT VQVVSAHRMP HEMLQHGVDA 
AAAGYRVVIA GAGGAAHLPG MLASVTPLPV IGVPVPLKQL DGLDSLLSIV QMPAGVPVAT
VSVGGARNAG LLAARILAAG TDEQALALRS RIEAFQESLR DAAHAKGQAL ARRLHAADEE
RPPATTLTPT PEDS