Gene Ksed_08410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_08410 
Symbol 
ID8372350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp856823 
End bp858055 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content76% 
IMG OID644991125 
Productphosphoribosylaminoimidazole carboxylase 
Protein accessionYP_003148660 
Protein GI256824700 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) 
TIGRFAM ID[TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.286057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.136388 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACG CCGCTTCCCC CGCCATGTCC CGCCCCCTCG TCCCGCAGGG GACGCCCATC 
GTCGGCATCG TCGGCGGCGG GCAGCTCGCG CGCATGTGCG CCGGGCCCGC CACGGAGCTG
GGGCTGGGTG TGGTGGTGCT GGCCGAGTCC GCCGACGCGG CCGCCGCCCA GGTGTACGCG
CACGCCCCCG TCGGGCGGGC CGACGACCTG GAGCGCCTGC AGGAGCTCGC CCGGGTCTGC
GACGTCGTGA CCTTCGACCA CGAGCACGTC CCCGGCGAGC TGCTGGCGGT CCTGGAGTCC
GAGGGCGTGG CCCTGCACCC CGCGCCGTCC GCCCTCCTCC ACGCCCAGGA CAAGCTCGTC
ATGCGGCGCG CGCTGGGGGA GGCGGGGCTC CCCGTGCCCC GATGGGGTGA GGTCACCTCC
CGCGCCGAGC TCGAGGAGTT CGCCGGCGGC GAGTGGCCGG TGGTGCTCAA GACCCCCCGG
GGTGGCTACG ACGGCAAGGG CGTGATGGTG GTGACCGGCG CCGACGACCT GGGCCGGGCC
GAGGAGTGGT TCGACCGGGC CGGTGGGGAG CCGCTGCTGG CCGAGGAGGC CGTGGCCTTC
GGTCGCGAGC TCGCCGTGCT CGTGGCGCGG AACCCCTCGG GTGAGGTGCG CTCCTGGCCG
GTGGTGCACA CGGTGCAGGA GCAGGGCATC TGCACCCGGG TGGAGGCCCC CGCACCGGAG
CTCGACCCGG ATCTGGCCCG GGACGTCCGG CAGGCGGCCG AGCAGCTGGC CGTGGACCTC
GGGGTGACCG GGGTGATGGC CGTGGAGATC TTCGAGACCG GCACCCCGGC CGAGGGCGAC
CGGGGCTGGG TGGTCAACGA GCTCGCGATG CGACCCCACA ACTCCGGCCA CTGGACGCAG
GACGGTGCCG TCACCGACCA GTTCGAGCAG CACCTGCGCG CCGTGCTCGA CCTGCCCCTC
GGCGACACCT CCCCCCGTGC CGCACACACC GTCATGGCCA ACGTGCTGGG GGGTTCGGCC
GAGGACCTGC ACGCGGCCTC CCGCCGGGTG ATGGCCCAGG ACGCCGGGGC CCGCCTGCAC
CTCTACGGCA AGGAGGTCCG CCCCGGGCGG AAGGTCGGCC ACGTCACGGT GACCGGGGAG
GACCTGGACG GGCTGCGGCG CCGCGCGACG ATCGCGCGCG GCCTGCTCGA GGGGACCGAC
GACGCACCCA CCACTGAGGG AGACACCCCG TGA
 
Protein sequence
MTDAASPAMS RPLVPQGTPI VGIVGGGQLA RMCAGPATEL GLGVVVLAES ADAAAAQVYA 
HAPVGRADDL ERLQELARVC DVVTFDHEHV PGELLAVLES EGVALHPAPS ALLHAQDKLV
MRRALGEAGL PVPRWGEVTS RAELEEFAGG EWPVVLKTPR GGYDGKGVMV VTGADDLGRA
EEWFDRAGGE PLLAEEAVAF GRELAVLVAR NPSGEVRSWP VVHTVQEQGI CTRVEAPAPE
LDPDLARDVR QAAEQLAVDL GVTGVMAVEI FETGTPAEGD RGWVVNELAM RPHNSGHWTQ
DGAVTDQFEQ HLRAVLDLPL GDTSPRAAHT VMANVLGGSA EDLHAASRRV MAQDAGARLH
LYGKEVRPGR KVGHVTVTGE DLDGLRRRAT IARGLLEGTD DAPTTEGDTP