Gene Ksed_08390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_08390 
Symbol 
ID8372348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp855034 
End bp856071 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content73% 
IMG OID644991123 
Productsignal transduction histidine kinase 
Protein accessionYP_003148658 
Protein GI256824698 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.0723991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.184348 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCCGG TCACCCTGCG GCAGCTGTGG TCCTCGGTGG TCGGCAAGGC CGTCCGGGTG 
GCCCAGCTCT GTGCCCTGTT CCCGGTAGCG GTGGCCGTGG CCCTGGGGCT GTGGGCCACC
CTCACCGAGA CCGGCCCACC CCTGTGGGCC TGGCTCGGGG TGCCGTTGGC CGTGCTCGCC
GGCATGCGCC TGACGAGCCT CTTCAACGCC GGGCGGGTGG CCGAGGCGCT CGCCGGGCCC
GAGGGCACCA TCGACGCCCT GGCCCGGCGC ATCCCGGGCA TGGGAACCGG TGAGAGCACC
CGCGCCCGTC CGGAGCTCAC CGGCATCGTG GAGATCGACG ACCTCTCCGA TGCGGTGCAG
CGTCGCGCCG TGCACCTCAC CCAGATGGTC ACCTCGCAGC GGCGCCTGGC CGGCGACGCC
GCCCACCAGC TGCGGACGCC GCTCTCGGCA CTGACCATCC GCATGGACGA GGTCGCGATG
GCCGAGACGC TCGAGGAGGC CCACCAGCTG GCCGAGGGGG CGCACACCCA GGTGGAGCGC
CTGACCTCCG TCGTCGAGGA GATGCTGGAG AGCGCGGCGA ACGCTGCCCT GGCCACCACC
GACGTCCTGC TGCTGGACGA GATCATCGCC GCGCAGCAGC ACGAGTGGCA GCCCATGTTC
GCCGCCCAAC GGCGGGGGAT GCGGGTGACG GGCACCTTTG GGCTGCACGT CGCCTGCCCG
CGGGGGGTGC TCTCGCAGGT GCTGTCCACC CTCATCGAGA ACTCGTTGAC CTACGGGGAG
GGGATCATCA CCCTGCGCAT CGAGGACAAC GGGCCGTCGG TGCAGCTCGT CCTCAGCGAC
GAGGGGCCGG GGATCGCCCC GGAGATCGCC GACCGCATCT TCGAGCGCCA CGTGACCTCC
GGCGCGGGGA CGGGGCGCGG CCTGGCGCTC GCACGGCAGA TCATCACGGC CGTCGGGGGA
CGGCTGGAGC TGCTGGACGA GCGGCGCGCG ACCTTCGGGG TCTTCCTCTC GACGCCCGTC
GAGGCGCCCA CCCGCTGA
 
Protein sequence
MAPVTLRQLW SSVVGKAVRV AQLCALFPVA VAVALGLWAT LTETGPPLWA WLGVPLAVLA 
GMRLTSLFNA GRVAEALAGP EGTIDALARR IPGMGTGEST RARPELTGIV EIDDLSDAVQ
RRAVHLTQMV TSQRRLAGDA AHQLRTPLSA LTIRMDEVAM AETLEEAHQL AEGAHTQVER
LTSVVEEMLE SAANAALATT DVLLLDEIIA AQQHEWQPMF AAQRRGMRVT GTFGLHVACP
RGVLSQVLST LIENSLTYGE GIITLRIEDN GPSVQLVLSD EGPGIAPEIA DRIFERHVTS
GAGTGRGLAL ARQIITAVGG RLELLDERRA TFGVFLSTPV EAPTR