Gene Ksed_08060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_08060 
Symbol 
ID8372315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp819722 
End bp820978 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content67% 
IMG OID644991090 
Productarabinose efflux permease family protein 
Protein accessionYP_003148625 
Protein GI256824665 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCTGC TCGCCCAGTT CGTGATCCCA CTGTCCATCT CCGGAACCGC CGTCGCGCTC 
CCCGCGATCG CTGGTGATCT GGGGGCAAGT CCGACACCGT TGCAGTGGGT AGTCAACGGC
TTCAACGTCT CATTCGCGAT CTGCACCATC GTGTGGGGCG CGTGCTCCGA CCGGATCGGA
TACACGCGCT CGTTCCGCAT CGGCATCGTC ATCGCCGCCG CCGGCGGCGT CATCAGCGTG
CTCGCCCCGA ACATCCTCAC ACTGGATATC GGCCGCGTCA TCGCGGGCAT TGGCTCCGCC
GCCGTGCTCA CCGGTGCCGC CCCGATCCTC AGCCACCTGT TCAAGGGAAA AGCTAGGGCT
CAGGCATTCG CACTCTTCGG CACGATCAAC GGTCTCGGCC TCGCCGCTGG CCCCGCCCTG
TCGGGGCTGC TCCTAGCGGC CTGGGGATGG CAGGGCATCT TCGCTGCACA CACGATCGTC
CTGGTCATCG CATTCATCGG TGCGGCCCGG GTTCCCCAGC TCGGGCGCGG TGCGACCTCG
CTGCGGGAGA TGCTGGACTT CTCCGCACTG AAAGCACCGA GATTCCTTGC CATGACGCTG
GTTCCCGTGG CCGGAGCGAT CGGGTTCGTC ACGTTCCTGA CCTACCTCCC CAGTGCACTC
GGGGCCATCC ACGGCCTCAC CGCTGGAGTC ACGGGTGCGC TGATGCTGGT GATGACCATC
CCGGTGCTCA TCGCCCCCGT CCTCGTCCAC CGGATCATGG AGCGCACGCG CATCACGCCA
ACCGTGATCG TCACGGCCTC GTTCGCAAGC CTCGTCATCG GCGGCGTCGG CGTACTGCTC
CTGCTGCGCC CGGACATGCC GATCGCTCTC GGTGTCGCAC CGATGATCCT GCTCGGCCTG
GGCTTCGGCC TACCGCTTGG ATTTGTCGAC GCCGAAGCCC TCGCCGCGGT GCCCGCCGAA
CGAGCAGGGG CAGCCTCCGG TGTCATCAAC CTCTTCCGCA TCGGCTCCGA GGCCATCTTC
GTCGCCGCCT ACGCCGCGAT CCTCGCCGCC GTCATCACCA CCGCTCTCCC CGGTGAGACA
GGCCAACTGA TCGCGTCCGG TGGCACCGGG CACCCCTGGG CCTACTACAA CGGCCTCATC
GCCGCAGCGG TGGCCATGAT CGGCCTCGTC ATCGTCCTGG GAATCGCTTT CCTCGCACTC
AGCAGAGCAG CCCGCCGCAC AGCAGCCTCC CCTCAGCAGG CCAGAACCGC ACGATGA
 
Protein sequence
MILLAQFVIP LSISGTAVAL PAIAGDLGAS PTPLQWVVNG FNVSFAICTI VWGACSDRIG 
YTRSFRIGIV IAAAGGVISV LAPNILTLDI GRVIAGIGSA AVLTGAAPIL SHLFKGKARA
QAFALFGTIN GLGLAAGPAL SGLLLAAWGW QGIFAAHTIV LVIAFIGAAR VPQLGRGATS
LREMLDFSAL KAPRFLAMTL VPVAGAIGFV TFLTYLPSAL GAIHGLTAGV TGALMLVMTI
PVLIAPVLVH RIMERTRITP TVIVTASFAS LVIGGVGVLL LLRPDMPIAL GVAPMILLGL
GFGLPLGFVD AEALAAVPAE RAGAASGVIN LFRIGSEAIF VAAYAAILAA VITTALPGET
GQLIASGGTG HPWAYYNGLI AAAVAMIGLV IVLGIAFLAL SRAARRTAAS PQQARTAR