Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_08060 |
Symbol | |
ID | 8372315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 819722 |
End bp | 820978 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644991090 |
Product | arabinose efflux permease family protein |
Protein accession | YP_003148625 |
Protein GI | 256824665 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCCTGC TCGCCCAGTT CGTGATCCCA CTGTCCATCT CCGGAACCGC CGTCGCGCTC CCCGCGATCG CTGGTGATCT GGGGGCAAGT CCGACACCGT TGCAGTGGGT AGTCAACGGC TTCAACGTCT CATTCGCGAT CTGCACCATC GTGTGGGGCG CGTGCTCCGA CCGGATCGGA TACACGCGCT CGTTCCGCAT CGGCATCGTC ATCGCCGCCG CCGGCGGCGT CATCAGCGTG CTCGCCCCGA ACATCCTCAC ACTGGATATC GGCCGCGTCA TCGCGGGCAT TGGCTCCGCC GCCGTGCTCA CCGGTGCCGC CCCGATCCTC AGCCACCTGT TCAAGGGAAA AGCTAGGGCT CAGGCATTCG CACTCTTCGG CACGATCAAC GGTCTCGGCC TCGCCGCTGG CCCCGCCCTG TCGGGGCTGC TCCTAGCGGC CTGGGGATGG CAGGGCATCT TCGCTGCACA CACGATCGTC CTGGTCATCG CATTCATCGG TGCGGCCCGG GTTCCCCAGC TCGGGCGCGG TGCGACCTCG CTGCGGGAGA TGCTGGACTT CTCCGCACTG AAAGCACCGA GATTCCTTGC CATGACGCTG GTTCCCGTGG CCGGAGCGAT CGGGTTCGTC ACGTTCCTGA CCTACCTCCC CAGTGCACTC GGGGCCATCC ACGGCCTCAC CGCTGGAGTC ACGGGTGCGC TGATGCTGGT GATGACCATC CCGGTGCTCA TCGCCCCCGT CCTCGTCCAC CGGATCATGG AGCGCACGCG CATCACGCCA ACCGTGATCG TCACGGCCTC GTTCGCAAGC CTCGTCATCG GCGGCGTCGG CGTACTGCTC CTGCTGCGCC CGGACATGCC GATCGCTCTC GGTGTCGCAC CGATGATCCT GCTCGGCCTG GGCTTCGGCC TACCGCTTGG ATTTGTCGAC GCCGAAGCCC TCGCCGCGGT GCCCGCCGAA CGAGCAGGGG CAGCCTCCGG TGTCATCAAC CTCTTCCGCA TCGGCTCCGA GGCCATCTTC GTCGCCGCCT ACGCCGCGAT CCTCGCCGCC GTCATCACCA CCGCTCTCCC CGGTGAGACA GGCCAACTGA TCGCGTCCGG TGGCACCGGG CACCCCTGGG CCTACTACAA CGGCCTCATC GCCGCAGCGG TGGCCATGAT CGGCCTCGTC ATCGTCCTGG GAATCGCTTT CCTCGCACTC AGCAGAGCAG CCCGCCGCAC AGCAGCCTCC CCTCAGCAGG CCAGAACCGC ACGATGA
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Protein sequence | MILLAQFVIP LSISGTAVAL PAIAGDLGAS PTPLQWVVNG FNVSFAICTI VWGACSDRIG YTRSFRIGIV IAAAGGVISV LAPNILTLDI GRVIAGIGSA AVLTGAAPIL SHLFKGKARA QAFALFGTIN GLGLAAGPAL SGLLLAAWGW QGIFAAHTIV LVIAFIGAAR VPQLGRGATS LREMLDFSAL KAPRFLAMTL VPVAGAIGFV TFLTYLPSAL GAIHGLTAGV TGALMLVMTI PVLIAPVLVH RIMERTRITP TVIVTASFAS LVIGGVGVLL LLRPDMPIAL GVAPMILLGL GFGLPLGFVD AEALAAVPAE RAGAASGVIN LFRIGSEAIF VAAYAAILAA VITTALPGET GQLIASGGTG HPWAYYNGLI AAAVAMIGLV IVLGIAFLAL SRAARRTAAS PQQARTAR
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