Gene Ksed_07960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_07960 
Symbol 
ID8372305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp806455 
End bp806886 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content76% 
IMG OID644991080 
Productcytidine deaminase 
Protein accessionYP_003148615 
Protein GI256824655 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0295] Cytidine deaminase 
TIGRFAM ID[TIGR01354] cytidine deaminase, homotetrameric 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCC CGGACGACGC CGGCTCGATG CGGGGCGAGG CGCCCCGCAT CGAGTGGGAC 
GCCCTGCTCG ATGCGGCGCG CGCGGCCATG CGCCGCGCCT ACGCCCCCTA CTCGGGCTAC
CCGGTCGGCG CGGCCGGCCT GGTGGAGGAC GGGCGCGTGG TCTCGGGCTG CAACGTGGAG
AACGCCGGCT ACGGCGTCAC CCTGTGCGCG GAGTGCGGGA TGGTCAGTGA GCTGGTGAAC
TCCGGCGGTG GACGCCTGGT CGCGGTGGCC TGCGTGCAGC GCGACGGCGA GGTCGTCATG
CCCTGCGGCC GGTGCCGCCA GCTGCTCGTG GAGCACGGGG GCCCCGAGTG CCTGGTGACG
GCGCCGGACG GCACGCCCCG GACCGTGGCG GAGTTGGTGC CGCTGGCCTT CGGGGCCGAC
GACCTGGCCT GA
 
Protein sequence
MSTPDDAGSM RGEAPRIEWD ALLDAARAAM RRAYAPYSGY PVGAAGLVED GRVVSGCNVE 
NAGYGVTLCA ECGMVSELVN SGGGRLVAVA CVQRDGEVVM PCGRCRQLLV EHGGPECLVT
APDGTPRTVA ELVPLAFGAD DLA